Information for 6-AGATCATATTTTTAAA (Motif 14)

C T G A T C A G C G T A C G A T G A T C C G T A C G A T C G T A G A C T G A C T A C G T A G C T C G A T C G T A C T G A C G T A
Reverse Opposite:
A C G T G A C T C G A T C G T A C T G A C G T A C T G A C G T A A C G T G C T A C G A T C T A G C G T A G A C T A G T C A G C T
p-value:1e-10
log p-value:-2.400e+01
Information Content per bp:1.711
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.0 +/- 30.4bp
Average Position of motif in Background47.2 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGATCATATTTTTAAA--
---TTCTATTTTTAGNNN
 C T G A T C A G C G T A C G A T G A T C C G T A C G A T C G T A G A C T G A C T A C G T A G C T C G A T C G T A C T G A C G T A A C G T A C G T
A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGATCATATTTTTAAA
----TCTATTTTTAGA
 C T G A T C A G C G T A C G A T G A T C C G T A C G A T C G T A G A C T G A C T A C G T A G C T C G A T C G T A C T G A C G T A
A C G T A C G T A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGATCATATTTTTAAA--
----AATATTAATAAAGA
 C T G A T C A G C G T A C G A T G A T C C G T A C G A T C G T A G A C T G A C T A C G T A G C T C G A T C G T A C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGATCATATTTTTAAA
----KCTATTTTTRGH
 C T G A T C A G C G T A C G A T G A T C C G T A C G A T C G T A G A C T G A C T A C G T A G C T C G A T C G T A C T G A C G T A
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PB0080.1_Tbp_1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGATCATATTTTTAAA----
----NANTTATATATAANGN
 C T G A T C A G C G T A C G A T G A T C C G T A C G A T C G T A G A C T G A C T A C G T A G C T C G A T C G T A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AGATCATATTTTTAAA
NNNNNBAGATAWYATCTVHN--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G C G T A C G A T G A T C C G T A C G A T C G T A G A C T G A C T A C G T A G C T C G A T C G T A C T G A C G T A
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGATCATATTTTTAAA
----TCTATTTATAGN
 C T G A T C A G C G T A C G A T G A T C C G T A C G A T C G T A G A C T G A C T A C G T A G C T C G A T C G T A C T G A C G T A
A C G T A C G T A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.55
Offset:9
Orientation:forward strand
Alignment:AGATCATATTTTTAAA--
---------ATTTGAATT
 C T G A T C A G C G T A C G A T G A T C C G T A C G A T C G T A G A C T G A C T A C G T A G C T C G A T C G T A C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGATCATATTTTTAAA
----GCTATTTTTAGC
 C T G A T C A G C G T A C G A T G A T C C G T A C G A T C G T A G A C T G A C T A C G T A G C T C G A T C G T A C T G A C G T A
A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PB0116.1_Elf3_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGATCATATTTTTAAA--
-GNATTTTTTTTTTGANC
 C T G A T C A G C G T A C G A T G A T C C G T A C G A T C G T A G A C T G A C T A C G T A G C T C G A T C G T A C T G A C G T A A C G T A C G T
A C G T C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C