Information for 14-ATCAAATATC (Motif 37)

C G T A A C G T T A G C C G T A C G T A C G T A A C G T C T G A A C G T A G T C
Reverse Opposite:
A C T G G T C A A G C T C G T A A C G T A C G T A C G T A C T G C G T A A C G T
p-value:1e-7
log p-value:-1.682e+01
Information Content per bp:1.904
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif44.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets42.6 +/- 28.1bp
Average Position of motif in Background38.8 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATCAAATATC
ATTAAA----
 C G T A A C G T T A G C C G T A C G T A C G T A A C G T C T G A A C G T A G T C
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATCAAATATC
TAATCAATTA--
 A C G T A C G T C G T A A C G T T A G C C G T A C G T A C G T A A C G T C T G A A C G T A G T C
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ATCAAATATC
ACCCGTATCAAATTT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T T A G C C G T A C G T A C G T A A C G T C T G A A C G T A G T C
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATCAAATATC-
AAATTAATTAATC
 A C G T A C G T C G T A A C G T T A G C C G T A C G T A C G T A A C G T C T G A A C G T A G T C A C G T
C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATCAAATATC
GKMTCADRTTWC
 A C G T A C G T C G T A A C G T T A G C C G T A C G T A C G T A A C G T C T G A A C G T A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ATCAAATATC-
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T T A G C C G T A C G T A C G T A A C G T C T G A A C G T A G T C A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATCAAATATC
GKVTCADRTTWC
 A C G T A C G T C G T A A C G T T A G C C G T A C G T A C G T A A C G T C T G A A C G T A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATCAAATATC
NCYAATAAAA----
 A C G T A C G T A C G T A C G T C G T A A C G T T A G C C G T A C G T A C G T A A C G T C T G A A C G T A G T C
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATCAAATATC
GCAATAAAAA---
 A C G T A C G T A C G T C G T A A C G T T A G C C G T A C G T A C G T A A C G T C T G A A C G T A G T C
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ATCAAATATC
AACCCAATAAAATTCG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T T A G C C G T A C G T A C G T A A C G T C T G A A C G T A G T C
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G