Information for 11-TCMRGGCMGCTGCKGG (Motif 18)

A C G T A T G C G T A C C T G A A C T G A C T G A T G C G T C A A C T G A G T C A C G T A T C G A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C G T C A C T A G A T G C C G T A A C T G A G T C A C G T T A C G A G T C A G T C A G C T A C T G A T C G C G T A
p-value:1e-11
log p-value:-2.560e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.4 +/- 13.4bp
Average Position of motif in Background28.7 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TCMRGGCMGCTGCKGG
----CGCAGCTGCG--
 A C G T A T G C G T A C C T G A A C T G A C T G A T G C G T C A A C T G A G T C A C G T A T C G A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TCMRGGCMGCTGCKGG
----AGCAGCTGCT--
 A C G T A T G C G T A C C T G A A C T G A C T G A T G C G T C A A C T G A G T C A C G T A T C G A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TCMRGGCMGCTGCKGG
----AGCAGCTGCTNN
 A C G T A T G C G T A C C T G A A C T G A C T G A T G C G T C A A C T G A G T C A C G T A T C G A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TCMRGGCMGCTGCKGG
-----NCAGCTGCTG-
 A C G T A T G C G T A C C T G A A C T G A C T G A T G C G T C A A C T G A G T C A C G T A T C G A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TCMRGGCMGCTGCKGG
----GACAGCTGCAG-
 A C G T A T G C G T A C C T G A A C T G A C T G A T G C G T C A A C T G A G T C A C G T A T C G A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TCMRGGCMGCTGCKGG
----AACAGCTGCAG-
 A C G T A T G C G T A C C T G A A C T G A C T G A T G C G T C A A C T G A G T C A C G T A T C G A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCMRGGCMGCTGCKGG-
NNNNAGCAGCTGCTGAN
 A C G T A T G C G T A C C T G A A C T G A C T G A T G C G T C A A C T G A G T C A C G T A T C G A G T C A C G T A C T G A C T G A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCMRGGCMGCTGCKGG
---NNACAGCTGC---
 A C G T A T G C G T A C C T G A A C T G A C T G A T G C G T C A A C T G A G T C A C G T A T C G A G T C A C G T A C T G A C T G
A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCMRGGCMGCTGCKGG
-NGNGACAGCTGCN--
 A C G T A T G C G T A C C T G A A C T G A C T G A T G C G T C A A C T G A G T C A C G T A T C G A G T C A C G T A C T G A C T G
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TCMRGGCMGCTGCKGG
----NVCAGCTGBBNN
 A C G T A T G C G T A C C T G A A C T G A C T G A T G C G T C A A C T G A G T C A C G T A T C G A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C