Information for 5-GCAAGTTGCC (Motif 6)

C T A G T A G C T G C A C T G A C T A G G A C T A G C T C A T G A T G C G A T C
Reverse Opposite:
C T A G T A C G G T A C T C G A C T G A G A T C G A C T A C G T A T C G G A T C
p-value:1e-12
log p-value:-2.960e+01
Information Content per bp:1.488
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.26%
Number of Background Sequences with motif367.4
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets47.2 +/- 27.8bp
Average Position of motif in Background49.5 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GCAAGTTGCC
AAGGCAAGTGT--
 A C G T A C G T A C G T C T A G T A G C T G C A C T G A C T A G G A C T A G C T C A T G A T G C G A T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCAAGTTGCC--
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T C T A G T A G C T G C A C T G A C T A G G A C T A G C T C A T G A T G C G A T C A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAAGTTGCC
NTCAAGTGG--
 A C G T C T A G T A G C T G C A C T G A C T A G G A C T A G C T C A T G A T G C G A T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCAAGTTGCC
AGCGGAAGTG---
 A C G T A C G T A C G T C T A G T A G C T G C A C T G A C T A G G A C T A G C T C A T G A T G C G A T C
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCAAGTTGCC
ACVAGGAAGT----
 A C G T A C G T A C G T A C G T C T A G T A G C T G C A C T G A C T A G G A C T A G C T C A T G A T G C G A T C
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCAAGTTGCC---
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T C T A G T A G C T G C A C T G A C T A G G A C T A G C T C A T G A T G C G A T C A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAAGTTGCC
NTCAAGTGGN-
 A C G T C T A G T A G C T G C A C T G A C T A G G A C T A G C T C A T G A T G C G A T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCAAGTTGCC
CCGGAAGTGGC-
 A C G T A C G T C T A G T A G C T G C A C T G A C T A G G A C T A G C T C A T G A T G C G A T C
T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAAGTTGCC
AACAGGTGT--
 A C G T C T A G T A G C T G C A C T G A C T A G G A C T A G C T C A T G A T G C G A T C
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T

ETS(ETS)/Promoter/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCAAGTTGCC
AACCGGAAGT----
 A C G T A C G T A C G T A C G T C T A G T A G C T G C A C T G A C T A G G A C T A G C T C A T G A T G C G A T C
T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T A C G T A C G T A C G T A C G T