p-value: | 1e-3 |
log p-value: | -7.749e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.41% |
Number of Background Sequences with motif | 9.6 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 50.7 +/- 28.6bp |
Average Position of motif in Background | 20.0 +/- 13.5bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0208.1_Zscan4_2/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCACATACAA-- CGAAGCACACAAAATA |
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PB0104.1_Zscan4_1/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------GCACATACAA TACATGTGCACATAAAA |
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PB0026.1_Gm397_1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------GCACATACAA CAGATGTGCACATACGT |
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PB0130.1_Gm397_2/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCACATACAA-- AGCGGCACACACGCAA |
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HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCACATACAA GCACGTAY-- |
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HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCACATACAA GCACGTACCC |
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HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCACATACAA BGCACGTA--- |
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Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCACATACAA--- ATTTGCATACAATGG |
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PB0170.1_Sox17_2/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCACATACAA----- GACCACATTCATACAAT |
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TEAD1/MA0090.2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCACATACAA- -CACATTCCAT |
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