Information for 15-GKCCCTGACTGCCAGG (Motif 31)

A C T G A C G T A G T C A G T C G A T C A C G T A C T G T C G A A G T C C G A T A C T G A G T C A T G C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A T C G T C A G A G T C C G T A A C T G A G C T A G T C C G T A C T A G A C T G T C A G G T C A A G T C
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.829
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 18.4bp
Average Position of motif in Background52.8 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GKCCCTGACTGCCAGG-
-----TGAGTGACAGSC
 A C T G A C G T A G T C A G T C G A T C A C G T A C T G T C G A A G T C C G A T A C T G A G T C A T G C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GKCCCTGACTGCCAGG
----BTGABTGACAGS
 A C T G A C G T A G T C A G T C G A T C A C G T A C T G T C G A A G T C C G A T A C T G A G T C A T G C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GKCCCTGACTGCCAGG
----NTGATTGACAGN
 A C T G A C G T A G T C A G T C G A T C A C G T A C T G T C G A A G T C C G A T A C T G A G T C A T G C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GKCCCTGACTGCCAGG
------VGCTGWCAVB
 A C T G A C G T A G T C A G T C G A T C A C G T A C T G T C G A A G T C C G A T A C T G A G T C A T G C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GKCCCTGACTGCCAGG
-GTCATGCHTGRCTGS
 A C T G A C G T A G T C A G T C G A T C A C G T A C T G T C G A A G T C C G A T A C T G A G T C A T G C C G T A A C T G A C T G
A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GKCCCTGACTGCCAGG
--------TTGCCAAG
 A C T G A C G T A G T C A G T C G A T C A C G T A C T G T C G A A G T C C G A T A C T G A G T C A T G C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GKCCCTGACTGCCAGG
GGGGCTYGKCTGGGA--
 A C G T A C T G A C G T A G T C A G T C G A T C A C G T A C T G T C G A A G T C C G A T A C T G A G T C A T G C C G T A A C T G A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GKCCCTGACTGCCAGG
TGACCTTGAN-------
 A C G T A C T G A C G T A G T C A G T C G A T C A C G T A C T G T C G A A G T C C G A T A C T G A G T C A T G C C G T A A C T G A C T G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GKCCCTGACTGCCAGG-
----CTGTCTGTCACCT
 A C T G A C G T A G T C A G T C G A T C A C G T A C T G T C G A A G T C C G A T A C T G A G T C A T G C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GKCCCTGACTGCCAGG
TGACCTTGAV-------
 A C G T A C T G A C G T A G T C A G T C G A T C A C G T A C T G T C G A A G T C C G A T A C T G A G T C A T G C C G T A A C T G A C T G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T