Information for 2-ACCTGCCHKG (Motif 2)

C T G A G T A C A T G C A C G T A T C G G A T C A G T C G T A C C A T G C T A G
Reverse Opposite:
G A T C G T A C C A T G A C T G C T A G A T G C C G T A T A C G C A T G G A C T
p-value:1e-34
log p-value:-8.016e+01
Information Content per bp:1.635
Number of Target Sequences with motif203.0
Percentage of Target Sequences with motif27.88%
Number of Background Sequences with motif5107.6
Percentage of Background Sequences with motif11.10%
Average Position of motif in Targets49.3 +/- 25.2bp
Average Position of motif in Background49.9 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--ACCTGCCHKG
NNACTTGCCTT-
 A C G T A C G T C T G A G T A C A T G C A C G T A T C G G A T C A G T C G T A C C A T G C T A G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ACCTGCCHKG-
--CTGCCCGCA
 C T G A G T A C A T G C A C G T A T C G G A T C A G T C G T A C C A T G C T A G A C G T
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ACCTGCCHKG
--TTGCCAAG
 C T G A G T A C A T G C A C G T A T C G G A T C A G T C G T A C C A T G C T A G
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:forward strand
Alignment:ACCTGCCHKG-
--ATGCCCACC
 C T G A G T A C A T G C A C G T A T C G G A T C A G T C G T A C C A T G C T A G A C G T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--ACCTGCCHKG
NCACCTGTN---
 A C G T A C G T C T G A G T A C A T G C A C G T A T C G G A T C A G T C G T A C C A T G C T A G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.71
Offset:3
Orientation:forward strand
Alignment:ACCTGCCHKG-
---TGTCANYT
 C T G A G T A C A T G C A C G T A T C G G A T C A G T C G T A C C A T G C T A G A C G T
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACCTGCCHKG
SNGCACCTGCHS--
 A C G T A C G T A C G T A C G T C T G A G T A C A T G C A C G T A T C G G A T C A G T C G T A C C A T G C T A G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACCTGCCHKG
-GCTGTCAA-
 C T G A G T A C A T G C A C G T A T C G G A T C A G T C G T A C C A T G C T A G
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACCTGCCHKG
-CCTGTCAA-
 C T G A G T A C A T G C A C G T A T C G G A T C A G T C G T A C C A T G C T A G
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

Hes2/MA0616.1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACCTGCCHKG-
GCACGTGTCNNNN
 A C G T A C G T C T G A G T A C A T G C A C G T A T C G G A T C A G T C G T A C C A T G C T A G A C G T
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A