Information for 12-CTGGCACGCC (Motif 31)

A T G C A G C T A C T G C T A G A G T C C T G A A G T C C T A G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C T C A G G A C T A C T G A G T C G T A C T C G A T A C G
p-value:1e-7
log p-value:-1.714e+01
Information Content per bp:1.734
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif276.1
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets44.5 +/- 27.8bp
Average Position of motif in Background49.9 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCACGCC----
NNGGCCACGCCTTTN
 A C G T A T G C A G C T A C T G C T A G A G T C C T G A A G T C C T A G A G T C A G T C A C G T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTGGCACGCC-----
NTCGCGCGCCTTNNN
 A T G C A G C T A C T G C T A G A G T C C T G A A G T C C T A G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CTGGCACGCC
--AGCGCGCC
 A T G C A G C T A C T G C T A G A G T C C T G A A G T C C T A G A G T C A G T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CTGGCACGCC-----
ANCGCGCGCCCTTNN
 A T G C A G C T A C T G C T A G A G T C C T G A A G T C C T A G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTGGCACGCC-
-TBGCACGCAA
 A T G C A G C T A C T G C T A G A G T C C T G A A G T C C T A G A G T C A G T C A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTGGCACGCC--
--GCCMCRCCCH
 A T G C A G C T A C T G C T A G A G T C C T G A A G T C C T A G A G T C A G T C A C G T A C G T
A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTGGCACGCC-----
-GGCCACGCCCCCTT
 A T G C A G C T A C T G C T A G A G T C C T G A A G T C C T A G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CTGGCACGCC
----CACGCA
 A T G C A G C T A C T G C T A G A G T C C T G A A G T C C T A G A G T C A G T C
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGGCACGCC---
-GGCCACRCCCMK
 A T G C A G C T A C T G C T A G A G T C C T G A A G T C C T A G A G T C A G T C A C G T A C G T A C G T
A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTGGCACGCC--
--GGCACGCGTC
 A T G C A G C T A C T G C T A G A G T C C T G A A G T C C T A G A G T C A G T C A C G T A C G T
A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C