Information for 13-GDCGTGCATACAC (Motif 22)

A C T G C G T A A G T C A T C G A C G T A C T G A G T C C G T A A G C T C G T A A G T C G T C A A G T C
Reverse Opposite:
A C T G C A G T A C T G C G A T C T G A A C G T A C T G A G T C C G T A A T G C C T A G G A C T T G A C
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.796
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.1 +/- 30.2bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GDCGTGCATACAC--
CAGATGTGCACATACGT
 A C G T A C G T A C T G C G T A A G T C A T C G A C G T A C T G A G T C C G T A A G C T C G T A A G T C G T C A A G T C A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GDCGTGCATACAC--
TACATGTGCACATAAAA
 A C G T A C G T A C T G C G T A A G T C A T C G A C G T A C T G A G T C C G T A A G C T C G T A A G T C G T C A A G T C A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GDCGTGCATACAC----
-AGCGGCACACACGCAA
 A C T G C G T A A G T C A T C G A C G T A C T G A G T C C G T A A G C T C G T A A G T C G T C A A G T C A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GDCGTGCATACAC---
-ATTTGCATACAATGG
 A C T G C G T A A G T C A T C G A C G T A C T G A G T C C G T A A G C T C G T A A G T C G T C A A G T C A C G T A C G T A C G T
A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GDCGTGCATACAC
-AGATGCAATCCC
 A C T G C G T A A G T C A T C G A C G T A C T G A G T C C G T A A G C T C G T A A G T C G T C A A G T C
A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GDCGTGCATACAC
RTACGTGC------
 A C G T A C T G C G T A A G T C A T C G A C G T A C T G A G T C C G T A A G C T C G T A A G T C G T C A A G T C
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GDCGTGCATACAC
---ATGMATATDC
 A C T G C G T A A G T C A T C G A C G T A C T G A G T C C G T A A G C T C G T A A G T C G T C A A G T C
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GDCGTGCATACAC
GGACGTGC------
 A C G T A C T G C G T A A G T C A T C G A C G T A C T G A G T C C G T A A G C T C G T A A G T C G T C A A G T C
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GDCGTGCATACAC
TACGTGCV-----
 A C T G C G T A A G T C A T C G A C G T A C T G A G T C C G T A A G C T C G T A A G T C G T C A A G T C
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GDCGTGCATACAC---
NNTTTGCACACGGCCC
 A C T G C G T A A G T C A T C G A C G T A C T G A G T C C G T A A G C T C G T A A G T C G T C A A G T C A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C