Information for 11-GSARTTTYYAAGA (Motif 21)

A C T G A T C G C G T A C T A G A C G T A C G T A C G T A G C T A G T C C G T A C G T A A C T G C G T A
Reverse Opposite:
A C G T G T A C A C G T A C G T C T A G C T G A C G T A C G T A C G T A A G T C A C G T A T G C A G T C
p-value:1e-8
log p-value:-2.008e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets76.8 +/- 8.9bp
Average Position of motif in Background68.9 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GSARTTTYYAAGA-
---ATTTCCAAGAA
 A C T G A T C G C G T A C T A G A C G T A C G T A C G T A G C T A G T C C G T A C G T A A C T G C G T A A C G T
A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GSARTTTYYAAGA--
---NTTTCTNAGAAA
 A C T G A T C G C G T A C T A G A C G T A C G T A C G T A G C T A G T C C G T A C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GSARTTTYYAAGA
GGGAATTTCC----
 A C G T A C T G A T C G C G T A C T A G A C G T A C G T A C G T A G C T A G T C C G T A C G T A A C T G C G T A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GSARTTTYYAAGA
GGGAATTTCC----
 A C G T A C T G A T C G C G T A C T A G A C G T A C G T A C G T A G C T A G T C C G T A C G T A A C T G C G T A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GSARTTTYYAAGA---
-NNNTTTNTAATACNG
 A C T G A T C G C G T A C T A G A C G T A C G T A C G T A G C T A G T C C G T A C G T A A C T G C G T A A C G T A C G T A C G T
A C G T C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GSARTTTYYAAGA
-CGGTTTCAAA--
 A C T G A T C G C G T A C T A G A C G T A C G T A C G T A G C T A G T C C G T A C G T A A C T G C G T A
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GSARTTTYYAAGA--
----TTTCCCAGAAN
 A C T G A T C G C G T A C T A G A C G T A C G T A C G T A G C T A G T C C G T A C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GSARTTTYYAAGA
CCTTGCAATTTTTNN--
 A C G T A C G T A C G T A C G T A C T G A T C G C G T A C T A G A C G T A C G T A C G T A G C T A G T C C G T A C G T A A C T G C G T A
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GSARTTTYYAAGA----
---ATTTCCNGGAAATN
 A C T G A T C G C G T A C T A G A C G T A C G T A C G T A G C T A G T C C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GSARTTTYYAAGA-
----NTTTTACGAC
 A C T G A T C G C G T A C T A G A C G T A C G T A C G T A G C T A G T C C G T A C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C