Information for 8-GCATTAWATATCG (Motif 13)

A C T G A T G C C T G A C G A T A C G T C G T A C G A T G C T A A C G T G C T A C G A T A T G C A C T G
Reverse Opposite:
T G A C T A C G C G T A C G A T C G T A C G A T G C T A C G A T G T C A C G T A G A C T T A C G G T A C
p-value:1e-10
log p-value:-2.359e+01
Information Content per bp:1.703
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif93.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets48.0 +/- 26.2bp
Average Position of motif in Background55.1 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0125.1_Obox5_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GCATTAWATATCG
NANAGGGATTAATTATN-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C C T G A C G A T A C G T C G T A C G A T G C T A A C G T G C T A C G A T A T G C A C T G
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCATTAWATATCG
TAGAGGGATTAAATTTC-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C C T G A C G A T A C G T C G T A C G A T G C T A A C G T G C T A C G A T A T G C A C T G
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCATTAWATATCG--
-CATTAATTATTCAT
 A C T G A T G C C T G A C G A T A C G T C G T A C G A T G C T A A C G T G C T A C G A T A T G C A C T G A C G T A C G T
A C G T G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

POU4F3/MA0791.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCATTAWATATCG--
CTCATTAATTATGCAT
 A C G T A C T G A T G C C T G A C G A T A C G T C G T A C G A T G C T A A C G T G C T A C G A T A T G C A C T G A C G T A C G T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

PB0163.1_Six6_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCATTAWATATCG---
ANNNGGATATATCCNNN
 A C G T A C T G A T G C C T G A C G A T A C G T C G T A C G A T G C T A A C G T G C T A C G A T A T G C A C T G A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCATTAWATATCG---
TCTTTATATATAAATA
 A C T G A T G C C T G A C G A T A C G T C G T A C G A T G C T A A C G T G C T A C G A T A T G C A C T G A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PH0122.1_Obox2/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GCATTAWATATCG
TGAGGGGGATTAACTAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C T G A C G A T A C G T C G T A C G A T G C T A A C G T G C T A C G A T A T G C A C T G
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCATTAWATATCG
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T A C T G A T G C C T G A C G A T A C G T C G T A C G A T G C T A A C G T G C T A C G A T A T G C A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCATTAWATATCG
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T A C T G A T G C C T G A C G A T A C G T C G T A C G A T G C T A A C G T G C T A C G A T A T G C A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCATTAWATATCG--
CTCATTAATTATGCAT
 A C G T A C T G A T G C C T G A C G A T A C G T C G T A C G A T G C T A A C G T G C T A C G A T A T G C A C T G A C G T A C G T
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T