Information for 9-GTGCAGGCAC (Motif 14)

C T A G C G A T T A C G A T G C C G T A T C A G C T A G G T A C T G C A A T G C
Reverse Opposite:
A T C G A C G T A C T G A G T C A G T C C G A T A T C G A G T C G C T A G A T C
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.834
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif265.4
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets49.2 +/- 23.9bp
Average Position of motif in Background56.4 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTGCAGGCAC
CATGCGGGTAC
 A C G T C T A G C G A T T A C G A T G C C G T A T C A G C T A G G T A C T G C A A T G C
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GTGCAGGCAC
AAGGKGRCGCAGGCA-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T T A C G A T G C C G T A T C A G C T A G G T A C T G C A A T G C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGCAGGCAC
TGCGCAGGCGC
 A C G T C T A G C G A T T A C G A T G C C G T A T C A G C T A G G T A C T G C A A T G C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTGCAGGCAC--
--CCAGGAACAG
 C T A G C G A T T A C G A T G C C G T A T C A G C T A G G T A C T G C A A T G C A C G T A C G T
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGCAGGCAC
TATGCGGGTA-
 A C G T C T A G C G A T T A C G A T G C C G T A T C A G C T A G G T A C T G C A A T G C
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGCAGGCAC
TBGCACGCAA
 C T A G C G A T T A C G A T G C C G T A T C A G C T A G G T A C T G C A A T G C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGCAGGCAC--
GCGCATGCGCAG
 C T A G C G A T T A C G A T G C C G T A T C A G C T A G G T A C T G C A A T G C A C G T A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGCAGGCAC
-TNNGGGCAG
 C T A G C G A T T A C G A T G C C G T A T C A G C T A G G T A C T G C A A T G C
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTGCAGGCAC
---CACGCA-
 C T A G C G A T T A C G A T G C C G T A T C A G C T A G G T A C T G C A A T G C
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGCAGGCAC
-GGTTGGCAT
 C T A G C G A T T A C G A T G C C G T A T C A G C T A G G T A C T G C A A T G C
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T