Information for 7-TGCTTGCCTGAGG (Motif 11)

A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C C G A T A G T C C G T A A C T G T A C G A G T C C G T A C G T A A C T G A G T C C G T A
p-value:1e-9
log p-value:-2.177e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.4 +/- 22.6bp
Average Position of motif in Background25.6 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGCTTGCCTGAGG
GGGGCTYGKCTGGGA
 A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TGCTTGCCTGAGG
GTCATGCHTGRCTGS--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTGCCTGAGG
NNACTTGCCTT---
 A C G T A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGCTTGCCTGAGG--
----TGCCTGAGGCN
 A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGCTTGCCTGAGG----
--NTNGCCTCAGGCNNN
 A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TGCTTGCCTGAGG--
----NGCCTGAGGCN
 A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGCTTGCCTGAGG--
----NGCCTNAGGCN
 A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGCTTGCCTGAGG-
--WTGSCCTSAGGS
 A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C G T
A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTTGCCTGAGG
NGTCACGCTTGGCTGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCTTGCCTGAGG-
--ATGCCCTGAGGC
 A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C G T
A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C