Information for 14-CCACARGGGCAGT (Motif 15)

A G T C A G T C C G T A A G T C G T C A C T G A A C T G A C T G A C T G A G T C C G T A A C T G A C G T
Reverse Opposite:
G T C A A G T C A C G T A C T G A G T C A G T C A G T C A G C T A C G T A C T G A C G T C T A G A C T G
p-value:1e-8
log p-value:-1.934e+01
Information Content per bp:1.939
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.2 +/- 19.7bp
Average Position of motif in Background59.1 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCACARGGGCAGT
TGCCCTNAGGGCA--
 A C G T A C G T A G T C A G T C C G T A A G T C G T C A C T G A A C T G A C T G A C T G A G T C C G T A A C T G A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCACARGGGCAGT
TGCCCNNAGGGCA--
 A C G T A C G T A G T C A G T C C G T A A G T C G T C A C T G A A C T G A C T G A C T G A G T C C G T A A C T G A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCACARGGGCAGT
TGCCCTNAGGGCA--
 A C G T A C G T A G T C A G T C C G T A A G T C G T C A C T G A A C T G A C T G A C T G A G T C C G T A A C T G A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCACARGGGCAGT
---CAAGGHCANV
 A G T C A G T C C G T A A G T C G T C A C T G A A C T G A C T G A C T G A G T C C G T A A C T G A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCACARGGGCAGT
-BTCAAGGTCA--
 A G T C A G T C C G T A A G T C G T C A C T G A A C T G A C T G A C T G A G T C C G T A A C T G A C G T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCACARGGGCAGT
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C G T C A C T G A A C T G A C T G A C T G A G T C C G T A A C T G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCACARGGGCAGT
AAACCACAGAN-----
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G T C A C T G A A C T G A C T G A C T G A G T C C G T A A C T G A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCACARGGGCAGT
GTCCCCAGGGGA---
 A C G T A C G T A G T C A G T C C G T A A G T C G T C A C T G A A C T G A C T G A C T G A G T C C G T A A C T G A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCACARGGGCAGT
-NTCAAGGTCA--
 A G T C A G T C C G T A A G T C G T C A C T G A A C T G A C T G A C T G A G T C C G T A A C T G A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCACARGGGCAGT
---TNNGGGCAG-
 A G T C A G T C C G T A A G T C G T C A C T G A A C T G A C T G A C T G A G T C C G T A A C T G A C G T
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T