Information for 17-AATATAGCTA (Motif 38)

C G T A C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T
p-value:1e-5
log p-value:-1.216e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets85.3 +/- 6.5bp
Average Position of motif in Background33.6 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AATATAGCTA--
CTAATATTGCTAAA
 A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AATATAGCTA--
CTAATATTGCTAAA
 A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AATATAGCTA
DCYAAAAATAGM--
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AATATAGCTA
KCCAAAAATAGC--
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AATATAGCTA
GCTAAAAATAGC--
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AATATAGCTA
ATGCTAAAAATAGAA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AATATAGCTA
CCAAAAATAG---
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AATATAGCTA-
CAAGATGGCGGC
 A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AATATAGCTA
CCATATATGG---
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AATATAGCTA
TAATTTAATTA
 A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A