Information for 16-CGTCTGGCGC (Motif 37)

A G T C A C T G A C G T A G T C C G A T A C T G A C T G A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A G T C A G T C C G T A C T A G C G T A A G T C A C T G
p-value:1e-6
log p-value:-1.463e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets64.8 +/- 24.6bp
Average Position of motif in Background35.0 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CGTCTGGCGC------
NNNNTTGGCGCCGANNN
 A C G T A G T C A C T G A C G T A G T C C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CGTCTGGCGC
VBSYGTCTGG---
 A C G T A C G T A C G T A G T C A C T G A C G T A G T C C G A T A C T G A C T G A G T C A C T G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CGTCTGGCGC------
NNNNTTGGCGCCGANNN
 A C G T A G T C A C T G A C G T A G T C C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1/MA0024.3/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CGTCTGGCGC----
--TTTGGCGCCAAA
 A G T C A C T G A C G T A G T C C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CGTCTGGCGC
CTGTCTGG---
 A C G T A G T C A C T G A C G T A G T C C G A T A C T G A C T G A G T C A C T G A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGTCTGGCGC--
TGTCTGDCACCT
 A G T C A C T G A C G T A G T C C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CGTCTGGCGC--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGTCTGGCGC
GGTCTGGCAT
 A G T C A C T G A C G T A G T C C G A T A C T G A C T G A G T C A C T G A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CGTCTGGCGC---
-----GGCGCGCT
 A G T C A C T G A C G T A G T C C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGTCTGGCGC--
CTGTCTGTCACCT
 A C G T A G T C A C T G A C G T A G T C C G A T A C T G A C T G A G T C A C T G A G T C A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T