Information for 24-ACCTBAGCTGGCAGGG (Motif 36)

G C T A A G T C A G T C A C G T A G C T G C T A C T A G T A G C C G A T A C T G T A C G G T A C G C T A C T A G C T A G C T A G
Reverse Opposite:
A G T C A G T C A G T C C A G T A C T G A T G C A G T C G C T A A T C G A G T C C G A T T C G A G T C A A C T G C T A G C G A T
p-value:1e-6
log p-value:-1.560e+01
Information Content per bp:1.695
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif50.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets57.2 +/- 17.5bp
Average Position of motif in Background48.7 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.57
Offset:7
Orientation:forward strand
Alignment:ACCTBAGCTGGCAGGG
-------TTGCCAAG-
 G C T A A G T C A G T C A C G T A G C T G C T A C T A G T A G C C G A T A C T G T A C G G T A C G C T A C T A G C T A G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ACCTBAGCTGGCAGGG
-----TNNGGGCAG--
 G C T A A G T C A G T C A C G T A G C T G C T A C T A G T A G C C G A T A C T G T A C G G T A C G C T A C T A G C T A G C T A G
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACCTBAGCTGGCAGGG
-CCATATATGGNA---
 G C T A A G T C A G T C A C G T A G C T G C T A C T A G T A G C C G A T A C T G T A C G G T A C G C T A C T A G C T A G C T A G
A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACCTBAGCTGGCAGGG
TGWCCTCARNTGACC---
 A C G T A C G T G C T A A G T C A G T C A C G T A G C T G C T A C T A G T A G C C G A T A C T G T A C G G T A C G C T A C T A G C T A G C T A G
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.56
Offset:7
Orientation:forward strand
Alignment:ACCTBAGCTGGCAGGG--
-------AAGGCAAGTGT
 G C T A A G T C A G T C A C G T A G C T G C T A C T A G T A G C C G A T A C T G T A C G G T A C G C T A C T A G C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACCTBAGCTGGCAGGG
--CACAGCAGGGGG--
 G C T A A G T C A G T C A C G T A G C T G C T A C T A G T A G C C G A T A C T G T A C G G T A C G C T A C T A G C T A G C T A G
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ACCTBAGCTGGCAGGG
-----GGTTGGCAT--
 G C T A A G T C A G T C A C G T A G C T G C T A C T A G T A G C C G A T A C T G T A C G G T A C G C T A C T A G C T A G C T A G
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACCTBAGCTGGCAGGG
TTCCATATATGGAA---
 A C G T G C T A A G T C A G T C A C G T A G C T G C T A C T A G T A G C C G A T A C T G T A C G G T A C G C T A C T A G C T A G C T A G
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:ACCTBAGCTGGCAGGG
-----ARNTGACA---
 G C T A A G T C A G T C A C G T A G C T G C T A C T A G T A G C C G A T A C T G T A C G G T A C G C T A C T A G C T A G C T A G
A C G T A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:ACCTBAGCTGGCAGGG
------NTTGGCANN-
 G C T A A G T C A G T C A C G T A G C T G C T A C T A G T A G C C G A T A C T G T A C G G T A C G C T A C T A G C T A G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T