Information for 20-CCTGCAGAGTVTGGGA (Motif 26)

A G T C A G T C C G A T T C A G A T G C C T G A A C T G T C G A A T C G G A C T T A C G A G C T A C T G A C T G C T A G G T C A
Reverse Opposite:
A C G T A G T C G T A C G T A C C T G A A T G C C T G A A T G C A G C T A G T C G A C T A T C G A G T C C G T A A C T G A C T G
p-value:1e-8
log p-value:-2.005e+01
Information Content per bp:1.772
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.2 +/- 21.5bp
Average Position of motif in Background64.4 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCAGAGTVTGGGA
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T T C A G A T G C C T G A A C T G T C G A A T C G G A C T T A C G A G C T A C T G A C T G C T A G G T C A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTGCAGAGTVTGGGA
CCTGCTGAGH------
 A G T C A G T C C G A T T C A G A T G C C T G A A C T G T C G A A T C G G A C T T A C G A G C T A C T G A C T G C T A G G T C A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGAGTVTGGGA
CCCCCTGCTGTG-------
 A C G T A C G T A C G T A G T C A G T C C G A T T C A G A T G C C T G A A C T G T C G A A T C G G A C T T A C G A G C T A C T G A C T G C T A G G T C A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGAGTVTGGGA
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A G T C A G T C C G A T T C A G A T G C C T G A A C T G T C G A A T C G G A C T T A C G A G C T A C T G A C T G C T A G G T C A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGAGTVTGGGA
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A G T C A G T C C G A T T C A G A T G C C T G A A C T G T C G A A T C G G A C T T A C G A G C T A C T G A C T G C T A G G T C A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGAGTVTGGGA
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A G T C A G T C C G A T T C A G A T G C C T G A A C T G T C G A A T C G G A C T T A C G A G C T A C T G A C T G C T A G G T C A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCAGAGTVTGGGA
TCCCNNGGGACN------
 A C G T A C G T A G T C A G T C C G A T T C A G A T G C C T G A A C T G T C G A A T C G G A C T T A C G A G C T A C T G A C T G C T A G G T C A
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----CCTGCAGAGTVTGGGA
GTCCCCAGGGGA--------
 A C G T A C G T A C G T A C G T A G T C A G T C C G A T T C A G A T G C C T G A A C T G T C G A A T C G G A C T T A C G A G C T A C T G A C T G C T A G G T C A
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:CCTGCAGAGTVTGGGA---
---------CSTGGGAAAD
 A G T C A G T C C G A T T C A G A T G C C T G A A C T G T C G A A T C G G A C T T A C G A G C T A C T G A C T G C T A G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCAGAGTVTGGGA
GACCCCCCGCTGTGC------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T T C A G A T G C C T G A A C T G T C G A A T C G G A C T T A C G A G C T A C T G A C T G C T A G G T C A
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T