Information for 4-KGGWTMYAMMAGW (Motif 8)

A C G T A C T G A C T G C G T A A C G T G T A C A G T C C G T A G T C A G T C A C G T A A C T G C G T A
Reverse Opposite:
C G A T A G T C A C G T A C G T A C G T A C G T C T A G C A G T C G T A C G A T A G T C A G T C G T C A
p-value:1e-8
log p-value:-1.879e+01
Information Content per bp:1.798
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif21.43%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.3 +/- 9.5bp
Average Position of motif in Background31.1 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:KGGWTMYAMMAGW
-GNCTATAAAAGG
 A C G T A C T G A C T G C G T A A C G T G T A C A G T C C G T A G T C A G T C A C G T A A C T G C G T A
A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:2
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:KGGWTMYAMMAGW
--VTTRCATAAY-
 A C G T A C T G A C T G C G T A A C G T G T A C A G T C C G T A G T C A G T C A C G T A A C T G C G T A
A C G T A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----KGGWTMYAMMAGW
TTAGAGGGATTAACAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T G T A C A G T C C G T A G T C A G T C A C G T A A C T G C G T A
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:KGGWTMYAMMAGW
NGGATTAN-----
 A C G T A C T G A C T G C G T A A C G T G T A C A G T C C G T A G T C A G T C A C G T A A C T G C G T A
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-KGGWTMYAMMAGW
NTTGATACATT---
 A C G T A C G T A C T G A C T G C G T A A C G T G T A C A G T C C G T A G T C A G T C A C G T A A C T G C G T A
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:6
Score:0.52
Offset:-9
Orientation:forward strand
Alignment:---------KGGWTMYAMMAGW-
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T G T A C A G T C C G T A G T C A G T C A C G T A A C T G C G T A A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:KGGWTMYAMMAGW
CGGTTTCAAA---
 A C G T A C T G A C T G C G T A A C G T G T A C A G T C C G T A G T C A G T C A C G T A A C T G C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:KGGWTMYAMMAGW
--NTTTTACGAGN
 A C G T A C T G A C T G C G T A A C G T G T A C A G T C C G T A G T C A G T C A C G T A A C T G C G T A
A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--KGGWTMYAMMAGW
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C T G A C T G C G T A A C G T G T A C A G T C C G T A G T C A G T C A C G T A A C T G C G T A
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---KGGWTMYAMMAGW-
ANNNGGATATATCCNNN
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T G T A C A G T C C G T A G T C A G T C A C G T A A C T G C G T A A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T