Information for 1-TAAGSAATKWAAA (Motif 5)

C G A T C G T A C G T A A C T G T A C G C G T A C G T A C G A T A C T G C G A T C G T A C T G A C G T A
Reverse Opposite:
A C G T G A C T A C G T G C A T G T A C C G T A C G A T A C G T A T C G A G T C A C G T A C G T C G T A
p-value:1e-8
log p-value:-2.000e+01
Information Content per bp:1.796
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif54.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets54.0 +/- 31.6bp
Average Position of motif in Background48.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0006.1_Barhl2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAAGSAATKWAAA-
AAAAACCAATTAAGAA
 A C G T A C G T C G A T C G T A C G T A A C T G T A C G C G T A C G T A C G A T A C T G C G A T C G T A C T G A C G T A A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

Hmx2/MA0897.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAAGSAATKWAAA---
ACAAGCAATTAAAGAAT
 A C G T C G A T C G T A C G T A A C T G T A C G C G T A C G T A C G A T A C T G C G A T C G T A C T G A C G T A A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAAGSAATKWAAA---
ACAAGCAATTAAAGAAT
 A C G T C G A T C G T A C G T A A C T G T A C G C G T A C G T A C G A T A C T G C G A T C G T A C T G A C G T A A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

Hmx3/MA0898.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAAGSAATKWAAA---
ACAAGCAATTAAAGAAT
 A C G T C G A T C G T A C G T A A C T G T A C G C G T A C G T A C G A T A C T G C G A T C G T A C T G A C G T A A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAAGSAATKWAAA---
ACAAGCAATTAAAGAAT
 A C G T C G A T C G T A C G T A A C T G T A C G C G T A C G T A C G A T A C T G C G A T C G T A C T G A C G T A A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAAGSAATKWAAA
CNTTAAGTACTTAANG
 A C G T A C G T A C G T C G A T C G T A C G T A A C T G T A C G C G T A C G T A C G A T A C T G C G A T C G T A C T G A C G T A
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

Hmx1/MA0896.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAAGSAATKWAAA---
ACAAGCAATTAATGAAT
 A C G T C G A T C G T A C G T A A C T G T A C G C G T A C G T A C G A T A C T G C G A T C G T A C T G A C G T A A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAAGSAATKWAAA---
ACAAGCAATTAATGAAT
 A C G T C G A T C G T A C G T A A C T G T A C G C G T A C G T A C G A T A C T G C G A T C G T A C T G A C G T A A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAAGSAATKWAAA----
TAATTAATTAATAACTA
 C G A T C G T A C G T A A C T G T A C G C G T A C G T A C G A T A C T G C G A T C G T A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

PH0108.1_Msx3/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAAGSAATKWAAA-
CAAAACCAATTAATTT
 A C G T A C G T C G A T C G T A C G T A A C T G T A C G C G T A C G T A C G A T A C T G C G A T C G T A C T G A C G T A A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T