Information for 23-CATTATAGGC (Motif 49)

A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C G T A C T G
p-value:1e-3
log p-value:-7.382e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.0 +/- 0.0bp
Average Position of motif in Background39.6 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CATTATAGGC
YCATTAMC---
 A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C T G A C T G A G T C
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATTATAGGC----
CCATTGTATGCAAAT
 A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------CATTATAGGC
GCAACCTCATTATNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C T G A C T G A G T C
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

HOXA5/MA0158.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CATTATAGGC
AATTAGTG--
 A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C T G A C T G A G T C
T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CATTATAGGC
AGCTCATTAT----
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C T G A C T G A G T C
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CATTATAGGC
ACTAATTAAA---
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C T G A C T G A G T C
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATTATAGGC
CTAATTAA----
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C T G A C T G A G T C
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CATTATAGGC-
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C T G A C T G A G T C A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0174.1_Sox30_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CATTATAGGC---
NCGTATTATAATCNTA
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

BARX1/MA0875.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATTATAGGC
GCAATTAG----
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C T G A C T G A G T C
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T