Information for 20-GTTACTCTGA (Motif 47)

A C T G A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G C G T A A C T G A C G T C G T A C G T A A G T C
p-value:1e-3
log p-value:-7.382e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background66.9 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTTACTCTGA
CTGTTGCTAGGS
 A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G C G T A
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Spz1/MA0111.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTTACTCTGA
GCTGTTACCCT--
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G C G T A
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTTACTCTGA--
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

SPIB/MA0081.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTTACTCTGA
-TTCCTCT--
 A C T G A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G C G T A
A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTTACTCTGA--
NAGGTCACNNTGACC
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTTACTCTGA------
NNTTCCTTTGATCTNNA
 A C G T A C T G A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTTACTCTGA--
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTTACTCTGA------
NNTTCCTTTGATCTANA
 A C G T A C T G A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GTTACTCTGA-
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G C G T A A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GTTACTCTGA------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A