Information for 23-CTCAACAACATCC (Motif 41)

A G T C A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A C T G A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C T G
p-value:1e-3
log p-value:-8.075e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCAACAACATCC
CAAACAACAACACCT
 A C G T A C G T A G T C A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A A C G T A G T C A G T C
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTCAACAACATCC---
----ACCACATCCTGT
 A G T C A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTCAACAACATCC
ATATCAAAACAAAACA-
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A A C G T A G T C A G T C
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTCAACAACATCC
ATGTCACAACAACAC--
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A A C G T A G T C A G T C
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTCAACAACATCC------
---GATAACATCCTAGTAG
 A G T C A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

Foxj2/MA0614.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCAACAACATCC
GTAAACAA-----
 A G T C A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A A C G T A G T C A G T C
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCAACAACATCC
--AAACCACANN-
 A G T C A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A A C G T A G T C A G T C
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCAACAACATCC
--AAACCACAGC-
 A G T C A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A A C G T A G T C A G T C
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTCAACAACATCC
CTGAGTCAGCAATTT--
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A A C G T A G T C A G T C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTCAACAACATCC
-NWAACCACADNN
 A G T C A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A A C G T A G T C A G T C
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C