Information for 22-TCGACTCTCTTTT (Motif 40)

A C G T A G T C A C T G C G T A A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C G T A G T C A C T G C G T A
p-value:1e-3
log p-value:-8.075e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCGACTCTCTTTT--
---ACTTTCGTTTCT
 A C G T A G T C A C T G C G T A A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCGACTCTCTTTT--
NNAATTCTCGNTNAN
 A C G T A G T C A C T G C G T A A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCGACTCTCTTTT--
---ACTTTCACTTTC
 A C G T A G T C A C T G C G T A A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TCGACTCTCTTTT--
ACCACTCTCGGTCAC
 A C G T A G T C A C T G C G T A A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCGACTCTCTTTT--
---ASTTTCASTTYC
 A C G T A G T C A C T G C G T A A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TCGACTCTCTTTT---
-TCACTTTCACTTTCN
 A C G T A G T C A C T G C G T A A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TCGACTCTCTTTT----
-----KCTATTTTTRGH
 A C G T A G T C A C T G C G T A A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TCGACTCTCTTTT------
----TTCTATTTTTAGNNN
 A C G T A G T C A C T G C G T A A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TCGACTCTCTTTT---
------CTATTTTTGG
 A C G T A G T C A C T G C G T A A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TCGACTCTCTTTT--
TNGAATTTCATTNAN
 A C G T A G T C A C T G C G T A A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A