Information for 4-WKSMSKRRRGTCTGGK (Motif 4)

C G T A C A T G A T C G G T A C T A G C A C G T T C A G C T G A C T A G A C T G A C G T A G T C C G A T A C T G A C T G A C G T
Reverse Opposite:
G T C A A G T C A G T C C G T A A C T G G T C A A G T C A G T C A G C T A G T C G T C A A T C G A C T G A T G C G T A C C G A T
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.747
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif21.43%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.7 +/- 35.8bp
Average Position of motif in Background64.6 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:WKSMSKRRRGTCTGGK----
---NNTNNTGTCTGGNNTNG
 C G T A C A T G A T C G G T A C T A G C A C G T T C A G C T G A C T A G A C T G A C G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.70
Offset:7
Orientation:forward strand
Alignment:WKSMSKRRRGTCTGGK
-------CTGTCTGG-
 C G T A C A T G A T C G G T A C T A G C A C G T T C A G C T G A C T A G A C T G A C G T A G T C C G A T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.70
Offset:5
Orientation:forward strand
Alignment:WKSMSKRRRGTCTGGK
-----VBSYGTCTGG-
 C G T A C A T G A T C G G T A C T A G C A C G T T C A G C T G A C T A G A C T G A C G T A G T C C G A T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.69
Offset:8
Orientation:forward strand
Alignment:WKSMSKRRRGTCTGGK--
--------GGTCTGGCAT
 C G T A C A T G A T C G G T A C T A G C A C G T T C A G C T G A C T A G A C T G A C G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.64
Offset:7
Orientation:forward strand
Alignment:WKSMSKRRRGTCTGGK
-------TWGTCTGV-
 C G T A C A T G A T C G G T A C T A G C A C G T T C A G C T G A C T A G A C T G A C G T A G T C C G A T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:8
Orientation:forward strand
Alignment:WKSMSKRRRGTCTGGK--
--------WDNCTGGGCA
 C G T A C A T G A T C G G T A C T A G C A C G T T C A G C T G A C T A G A C T G A C G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:WKSMSKRRRGTCTGGK---
----GGNGCGNCTGTTNNN
 C G T A C A T G A T C G G T A C T A G C A C G T T C A G C T G A C T A G A C T G A C G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:WKSMSKRRRGTCTGGK--------
---------GYCTGGYYTNTGTCA
 C G T A C A T G A T C G G T A C T A G C A C G T T C A G C T G A C T A G A C T G A C G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:WKSMSKRRRGTCTGGK-
-----NTGGGTGTGGCC
 C G T A C A T G A T C G G T A C T A G C A C G T T C A G C T G A C T A G A C T G A C G T A G T C C G A T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

PB0203.1_Zfp691_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:WKSMSKRRRGTCTGGK-
NTNNNAGGAGTCTCNTN
 C G T A C A T G A T C G G T A C T A G C A C G T T C A G C T G A C T A G A C T G A C G T A G T C C G A T A C T G A C T G A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A