Information for 20-AGTTGCAGTTAAT (Motif 39)

C G T A A C T G A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G A G T C C G T A C G T A A G T C A C G T
p-value:1e-3
log p-value:-8.075e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0063.1_Hoxb8/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGTTGCAGTTAAT---
ACCGGCAATTAATAAA
 C G T A A C T G A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

ISL2/MA0914.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGTTGCAGTTAAT
----GCACTTAA-
 C G T A A C T G A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTTGCAGTTAAT
--TGGCAGTTGN-
 C G T A A C T G A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTTGCAGTTAAT
--TTGCGGTTT--
 C G T A A C T G A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGTTGCAGTTAAT--
NNNTGGCAGTTGGTNN
 A C G T C G T A A C T G A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Hmx1/MA0896.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTTGCAGTTAAT----
ACAAGCAATTAATGAAT
 C G T A A C T G A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTTGCAGTTAAT----
ACAAGCAATTAATGAAT
 C G T A A C T G A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGTTGCAGTTAAT
--BRRCVGTTDN-
 C G T A A C T G A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTTGCAGTTAAT-----
-NTTTTAGTTAACNNAGN
 C G T A A C T G A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGTTGCAGTTAAT
--TGGCAGTTGG-
 C G T A A C T G A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T