Information for 18-CTTGTGGTAAAAT (Motif 37)

A G T C A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A A G T C C G T A C G T A A C T G
p-value:1e-3
log p-value:-8.075e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD11/MA0908.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTTGTGGTAAAAT
---GTCGTAAAAA
 A G T C A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

HOXC12/MA0906.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTTGTGGTAAAAT
--GGTCGTAAAAA
 A G T C A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTTGTGGTAAAAT---
CAAGGTCGTAAAATCTT
 A C G T A G T C A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0076.1_Hoxd11/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTTGTGGTAAAAT---
TAAGGTCGTAAAATCCT
 A C G T A G T C A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTTGTGGTAAAAT
--GGTCGTAAAAT
 A G T C A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTTGTGGTAAAAT
NNHTGTGGTTWN--
 A C G T A G T C A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTTGTGGTAAAAT
---GTCGTAAAAT
 A G T C A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

PH0066.1_Hoxc11/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTTGTGGTAAAAT--
TAAAGTCGTAAAATAG
 A C G T A G T C A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTTGTGGTAAAAT--
TAAAGTCGTAAAACGT
 A C G T A G T C A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTTGTGGTAAAAT-
--GGTCGTAAAATT
 A G T C A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T