Information for 17-TCTTTGTGTCCAA (Motif 36)

A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C T G C G T A
p-value:1e-3
log p-value:-8.075e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCTTTGTGTCCAA--
CCATTGTATGCAAAT
 A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCTTTGTGTCCAA
-CTTTGT------
 A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C C G T A C G T A
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCTTTGTGTCCAA
CCWTTGTYYB---
 A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C C G T A C G T A
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCTTTGTGTCCAA
CCTTTGTTTT---
 A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C C G T A C G T A
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCTTTGTGTCCAA
NNNCCATTGTGTNAN-
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C C G T A C G T A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCTTTGTGTCCAA
YCTTTGTTCC---
 A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C C G T A C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCTTTGTGTCCAA
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C C G T A C G T A
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCTTTGTGTCCAA
AGGVNCCTTTGT------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C C G T A C G T A
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCTTTGTGTCCAA--
NNNNTTGTGTGCTTNN
 A C G T A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCTTTGTGTCCAA
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C C G T A C G T A
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T