Information for 3-GACCTCTATAGGCATG (Motif 3)

A C T G C G T A G T A C G T A C C A G T T A G C G A C T C T G A A G C T C G T A C T A G C T A G A T G C C G T A A C G T A C T G
Reverse Opposite:
G T A C T G C A C G A T T A C G A G T C G A T C C G A T C T G A A G C T C G T A A C T G G C T A A C T G A C T G C G A T T A G C
p-value:1e-9
log p-value:-2.173e+01
Information Content per bp:1.632
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif35.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.8 +/- 28.4bp
Average Position of motif in Background61.3 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GACCTCTATAGGCATG
-AYATGYATATGCATR
 A C T G C G T A G T A C G T A C C A G T T A G C G A C T C T G A A G C T C G T A C T A G C T A G A T G C C G T A A C G T A C T G
A C G T C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GACCTCTATAGGCATG----
AACATGCCCAGACATGCCCN
 A C T G C G T A G T A C G T A C C A G T T A G C G A C T C T G A A G C T C G T A C T A G C T A G A T G C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GACCTCTATAGGCATG----
AACATGCCCAGACATGCCCN
 A C T G C G T A G T A C G T A C C A G T T A G C G A C T C T G A A G C T C G T A C T A G C T A G A T G C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T

TP53/MA0106.3/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GACCTCTATAGGCATG--
GACATGCCCGGGCATGTT
 A C T G C G T A G T A C G T A C C A G T T A G C G A C T C T G A A G C T C G T A C T A G C T A G A T G C C G T A A C G T A C T G A C G T A C G T
C T A G C T G A G A T C C G T A C G A T T A C G G A T C G A T C G A T C T C A G C T A G C T A G A G T C C G T A G C A T C T A G G A C T G A C T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCTATAGGCATG
TGACCTTGAT-------
 A C G T A C T G C G T A G T A C G T A C C A G T T A G C G A C T C T G A A G C T C G T A C T A G C T A G A T G C C G T A A C G T A C T G
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TP73/MA0861.1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GACCTCTATAGGCATG--
GACATGTCTGGACATGTC
 A C T G C G T A G T A C G T A C C A G T T A G C G A C T C T G A A G C T C G T A C T A G C T A G A T G C C G T A A C G T A C T G A C G T A C G T
C A T G T C G A A G T C C T G A C G A T T A C G G A C T G A T C A G C T C T A G C T A G C T G A A G T C C G T A G A C T A T C G G A C T G T A C

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GACCTCTATAGGCATG--
NRRRCAWGTCCDGRCATGYY
 A C G T A C G T A C T G C G T A G T A C G T A C C A G T T A G C G A C T C T G A A G C T C G T A C T A G C T A G A T G C C G T A A C G T A C T G A C G T A C G T
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GACCTCTATAGGCATG--
NNNGCATGTCNNGACATGCN
 A C G T A C G T A C T G C G T A G T A C G T A C C A G T T A G C G A C T C T G A A G C T C G T A C T A G C T A G A T G C C G T A A C G T A C T G A C G T A C G T
G T C A T C G A C T A G C T A G A G T C G T C A C G A T C T A G G A C T G A T C G A T C T C A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----GACCTCTATAGGCATG
CATAAGACCACCATTAC----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C G T A C C A G T T A G C G A C T C T G A A G C T C G T A C T A G C T A G A T G C C G T A A C G T A C T G
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--GACCTCTATAGGCATG
TTGACCTANTTATN----
 A C G T A C G T A C T G C G T A G T A C G T A C C A G T T A G C G A C T C T G A A G C T C G T A C T A G C T A G A T G C C G T A A C G T A C T G
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T A C G T A C G T A C G T