Information for 6-AAAATCCCGG (Motif 29)

C G T A C G T A C G T A C G T A A C G T A G T C A G T C A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.075e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets13.0 +/- 0.0bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAAATCCCGG
-TAATCCCN-
 C G T A C G T A C G T A C G T A A C G T A G T C A G T C A G T C A C T G A C T G
A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAAATCCCGG
GGAAATTCCC--
 A C G T A C G T C G T A C G T A C G T A C G T A A C G T A G T C A G T C A G T C A C T G A C T G
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAAATCCCGG
CAAATCACTG
 C G T A C G T A C G T A C G T A A C G T A G T C A G T C A G T C A C T G A C T G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAAATCCCGG--
-AAATCACAGCA
 C G T A C G T A C G T A C G T A A C G T A G T C A G T C A G T C A C T G A C T G A C G T A C G T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAAATCCCGG-
-AAATCACTGC
 C G T A C G T A C G T A C G T A A C G T A G T C A G T C A G T C A C T G A C T G A C G T
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAAATCCCGG---
NNTAATCCNGNCNN
 A C G T C G T A C G T A C G T A C G T A A C G T A G T C A G T C A G T C A C T G A C T G A C G T A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAAATCCCGG
GGAAATTCCC--
 A C G T A C G T C G T A C G T A C G T A C G T A A C G T A G T C A G T C A G T C A C T G A C T G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAAATCCCGG
GGAAATCCCC--
 A C G T A C G T C G T A C G T A C G T A C G T A A C G T A G T C A G T C A G T C A C T G A C T G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAAATCCCGG
CTTAATCCC--
 A C G T C G T A C G T A C G T A C G T A A C G T A G T C A G T C A G T C A C T G A C T G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAATCCCGG----
ACCACTCTCGGTCAC
 A C G T C G T A C G T A C G T A C G T A A C G T A G T C A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C