Information for 13-GHTGTCHCHGVHCCCA (Motif 22)

A C T G G A T C A G C T A T C G A G C T A G T C G A T C T G A C G A T C C T A G T G A C G A C T A T G C A T G C A T G C C T G A
Reverse Opposite:
A G C T A T C G A T C G T A C G C G T A A C T G A G T C C A T G A C T G C A T G C T A G C T G A A T G C C T G A C A T G A G T C
p-value:1e-5
log p-value:-1.248e+01
Information Content per bp:1.624
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif21.43%
Number of Background Sequences with motif99.4
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets62.0 +/- 21.8bp
Average Position of motif in Background55.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GHTGTCHCHGVHCCCA--
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C T G G A T C A G C T A T C G A G C T A G T C G A T C T G A C G A T C C T A G T G A C G A C T A T G C A T G C A T G C C T G A A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GHTGTCHCHGVHCCCA-
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C T G G A T C A G C T A T C G A G C T A G T C G A T C T G A C G A T C C T A G T G A C G A C T A T G C A T G C A T G C C T G A A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:3
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GHTGTCHCHGVHCCCA-
-----CCCCTCCCCCAC
 A C T G G A T C A G C T A T C G A G C T A G T C G A T C T G A C G A T C C T A G T G A C G A C T A T G C A T G C A T G C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GHTGTCHCHGVHCCCA
CCTGTCAA--------
 A C T G G A T C A G C T A T C G A G C T A G T C G A T C T G A C G A T C C T A G T G A C G A C T A T G C A T G C A T G C C T G A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.47
Offset:3
Orientation:forward strand
Alignment:GHTGTCHCHGVHCCCA
---GGCCCCGCCCCC-
 A C T G G A T C A G C T A T C G A G C T A G T C G A T C T G A C G A T C C T A G T G A C G A C T A T G C A T G C A T G C C T G A
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.47
Offset:4
Orientation:forward strand
Alignment:GHTGTCHCHGVHCCCA--
----CCCCCGCCCCCGCC
 A C T G G A T C A G C T A T C G A G C T A G T C G A T C T G A C G A T C C T A G T G A C G A C T A T G C A T G C A T G C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:GHTGTCHCHGVHCCCA
GCTGTCAA--------
 A C T G G A T C A G C T A T C G A G C T A G T C G A T C T G A C G A T C C T A G T G A C G A C T A T G C A T G C A T G C C T G A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.46
Offset:-5
Orientation:forward strand
Alignment:-----GHTGTCHCHGVHCCCA
AACTAGCTGTCAATAC-----
 A C G T A C G T A C G T A C G T A C G T A C T G G A T C A G C T A T C G A G C T A G T C G A T C T G A C G A T C C T A G T G A C G A C T A T G C A T G C A T G C C T G A
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T A C G T A C G T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:9
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:GHTGTCHCHGVHCCCA
GTTGCCATGGCAACCG
 A C T G G A T C A G C T A T C G A G C T A G T C G A T C T G A C G A T C C T A G T G A C G A C T A T G C A T G C A T G C C T G A
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.46
Offset:-5
Orientation:reverse strand
Alignment:-----GHTGTCHCHGVHCCCA
NNNCAGCTGTCAATATN----
 A C G T A C G T A C G T A C G T A C G T A C T G G A T C A G C T A T C G A G C T A G T C G A T C T G A C G A T C C T A G T G A C G A C T A T G C A T G C A T G C C T G A
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T A C G T A C G T