Information for 13-TGTTAGHTTTBCH (Motif 21)

C G A T C T A G A C G T A C G T C G T A C T A G G A T C A C G T C G A T A G C T A C T G A T G C G C T A
Reverse Opposite:
C A G T T A C G T G A C C T G A C G T A G T C A C T A G A G T C A C G T C G T A C G T A G A T C C G T A
p-value:1e-5
log p-value:-1.257e+01
Information Content per bp:1.686
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif21.43%
Number of Background Sequences with motif96.8
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets46.3 +/- 17.2bp
Average Position of motif in Background51.0 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTAGHTTTBCH
NCNTTTGTTATTTNN---
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T A C G T C G T A C T A G G A T C A C G T C G A T A G C T A C T G A T G C G C T A
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTTAGHTTTBCH
NNCAATTANN------
 A C G T A C G T A C G T C G A T C T A G A C G T A C G T C G T A C T A G G A T C A C G T C G A T A G C T A C T G A T G C G C T A
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGTTAGHTTTBCH
GAATGTTTGTTT----
 A C G T A C G T A C G T C G A T C T A G A C G T A C G T C G T A C T A G G A T C A C G T C G A T A G C T A C T G A T G C G C T A
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTAGHTTTBCH
NNNNCTGTTAACNNTNN-
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T A C G T C G T A C T A G G A T C A C G T C G A T A G C T A C T G A T G C G C T A
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGTTAGHTTTBCH
ATATTAATTAA---
 A C G T C G A T C T A G A C G T A C G T C G T A C T A G G A T C A C G T C G A T A G C T A C T G A T G C G C T A
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------TGTTAGHTTTBCH
TAAACTAATTAGCTTTG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T A C G T C G T A C T A G G A T C A C G T C G A T A G C T A C T G A T G C G C T A
C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGTTAGHTTTBCH
ACTAATTAGC------
 A C G T A C G T A C G T C G A T C T A G A C G T A C G T C G T A C T A G G A T C A C G T C G A T A G C T A C T G A T G C G C T A
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

GSX1/MA0892.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGTTAGHTTTBCH
CCTAATTAAA------
 A C G T A C G T A C G T C G A T C T A G A C G T A C G T C G T A C T A G G A T C A C G T C G A T A G C T A C T G A T G C G C T A
G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGTTAGHTTTBCH
ACTAATTAAA------
 A C G T A C G T A C G T C G A T C T A G A C G T A C G T C G T A C T A G G A T C A C G T C G A T A G C T A C T G A T G C G C T A
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTAGHTTTBCH
NNNTTAGTTAACTNANN-
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T A C G T C G T A C T A G G A T C A C G T C G A T A G C T A C T G A T G C G C T A
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T A C G T