Information for 11-CCAGCGTTGGTTT (Motif 17)

A T G C A T G C C T G A C T A G A T G C T A C G A C G T C G A T A C T G C T A G A C G T A C G T C G A T
Reverse Opposite:
C G T A T G C A T G C A G A T C G T A C C G T A G T C A A T G C T A C G G A T C G A C T A T C G T A C G
p-value:1e-6
log p-value:-1.415e+01
Information Content per bp:1.737
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 34.3bp
Average Position of motif in Background53.3 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCAGCGTTGGTTT
--TGCTGTGATTT
 A T G C A T G C C T G A C T A G A T G C T A C G A C G T C G A T A C T G C T A G A C G T A C G T C G A T
A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCAGCGTTGGTTT------
--TNNNATGATTTCNNCNN
 A T G C A T G C C T G A C T A G A T G C T A C G A C G T C G A T A C T G C T A G A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCAGCGTTGGTTT-
----CNGTGATTTN
 A T G C A T G C C T G A C T A G A T G C T A C G A C G T C G A T A C T G C T A G A C G T A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCAGCGTTGGTTT
---GCTGTGGTTT
 A T G C A T G C C T G A C T A G A T G C T A C G A C G T C G A T A C T G C T A G A C G T A C G T C G A T
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CCAGCGTTGGTTT----
-------TGGTTTCAGT
 A T G C A T G C C T G A C T A G A T G C T A C G A C G T C G A T A C T G C T A G A C G T A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCAGCGTTGGTTT-----
---GTNTTGTTGTGANNT
 A T G C A T G C C T G A C T A G A T G C T A C G A C G T C G A T A C T G C T A G A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCAGCGTTGGTTT
---NNTGTGGTTT
 A T G C A T G C C T G A C T A G A T G C T A C G A C G T C G A T A C T G C T A G A C G T A C G T C G A T
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCAGCGTTGGTTT
---GCAGTGATTT
 A T G C A T G C C T G A C T A G A T G C T A C G A C G T C G A T A C T G C T A G A C G T A C G T C G A T
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCAGCGTTGGTTT-
----CTGTGGTTTN
 A T G C A T G C C T G A C T A G A T G C T A C G A C G T C G A T A C T G C T A G A C G T A C G T C G A T A C G T
A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCAGCGTTGGTTT-------
---NNNTTGGTTTCGNTNNN
 A T G C A T G C C T G A C T A G A T G C T A C G A C G T C G A T A C T G C T A G A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G