Information for 5-ATTTHAGGABGBC (Motif 11)

C G T A A C G T A C G T A C G T G A T C C G T A A T C G A C T G C G T A A C T G C T A G A G T C G T A C
Reverse Opposite:
A C T G T A C G A G T C T A G C C G A T G T A C A T G C C G A T C A T G C G T A C G T A C G T A A C G T
p-value:1e-7
log p-value:-1.805e+01
Information Content per bp:1.721
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif88.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets53.0 +/- 22.0bp
Average Position of motif in Background46.5 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC10/MA0905.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATTTHAGGABGBC
NTTTTACGAC---
 C G T A A C G T A C G T A C G T G A T C C G T A A T C G A C T G C G T A A C T G C T A G A G T C G T A C
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATTTHAGGABGBC
GCTATTTTTGGM----
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T G A T C C G T A A T C G A C T G C G T A A C T G C T A G A G T C G T A C
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T A C G T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATTTHAGGABGBC
NTTTTACGAC---
 C G T A A C G T A C G T A C G T G A T C C G T A A T C G A C T G C G T A A C T G C T A G A G T C G T A C
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATTTHAGGABGBC
KCTATTTTTRGH----
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T G A T C C G T A A T C G A C T G C G T A A C T G C T A G A G T C G T A C
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATTTHAGGABGBC
CTATTTTTGG-----
 A C G T A C G T C G T A A C G T A C G T A C G T G A T C C G T A A T C G A C T G C G T A A C T G C T A G A G T C G T A C
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATTTHAGGABGBC-
ANATTTTACGAGNNNN
 A C G T A C G T C G T A A C G T A C G T A C G T G A T C C G T A A T C G A C T G C G T A A C T G C T A G A G T C G T A C A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTTHAGGABGBC
NTTTTACGAGN--
 C G T A A C G T A C G T A C G T G A T C C G T A A T C G A C T G C G T A A C T G C T A G A G T C G T A C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATTTHAGGABGBC-
NAATTTTACGAGNTNN
 A C G T A C G T C G T A A C G T A C G T A C G T G A T C C G T A A T C G A C T G C G T A A C T G C T A G A G T C G T A C A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATTTHAGGABGBC
ANTTTTACGACC--
 A C G T C G T A A C G T A C G T A C G T G A T C C G T A A T C G A C T G C G T A A C T G C T A G A G T C G T A C
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTTHAGGABGBC
NTTTTACGACC--
 C G T A A C G T A C G T A C G T G A T C C G T A A T C G A C T G C G T A A C T G C T A G A G T C G T A C
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T A C G T