Information for 6-MCAACAACAYTTTTTA (Motif 10)

G T C A T G A C G T C A G C T A T G A C C G T A T G C A A T G C C G T A A G C T C G A T A C G T G A C T G A C T G A C T G C T A
Reverse Opposite:
C G A T C T G A C T G A C T G A T G C A C G T A C T A G C G A T T A C G A C G T C G A T A C T G C G A T C A G T A C T G A C G T
p-value:1e-7
log p-value:-1.831e+01
Information Content per bp:1.587
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1050.5
Percentage of Background Sequences with motif2.34%
Average Position of motif in Targets39.7 +/- 21.1bp
Average Position of motif in Background51.0 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-MCAACAACAYTTTTTA
AACAATAACATTGTT--
 A C G T G T C A T G A C G T C A G C T A T G A C C G T A T G C A A T G C C G T A A G C T C G A T A C G T G A C T G A C T G A C T G C T A
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---MCAACAACAYTTTTTA
CAAACAACAACACCT----
 A C G T A C G T A C G T G T C A T G A C G T C A G C T A T G A C C G T A T G C A A T G C C G T A A G C T C G A T A C G T G A C T G A C T G A C T G C T A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-MCAACAACAYTTTTTA
AACACTACCATTGTT--
 A C G T G T C A T G A C G T C A G C T A T G A C C G T A T G C A A T G C C G T A A G C T C G A T A C G T G A C T G A C T G A C T G C T A
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:MCAACAACAYTTTTTA
AAACAAACATTC----
 G T C A T G A C G T C A G C T A T G A C C G T A T G C A A T G C C G T A A G C T C G A T A C G T G A C T G A C T G A C T G C T A
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----MCAACAACAYTTTTTA
ATGTCACAACAACAC------
 A C G T A C G T A C G T A C G T A C G T G T C A T G A C G T C A G C T A T G A C C G T A T G C A A T G C C G T A A G C T C G A T A C G T G A C T G A C T G A C T G C T A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:MCAACAACAYTTTTTA
-NANANAC--------
 G T C A T G A C G T C A G C T A T G A C C G T A T G C A A T G C C G T A A G C T C G A T A C G T G A C T G A C T G A C T G C T A
A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:MCAACAACAYTTTTTA
-----NCCATTGTTY-
 G T C A T G A C G T C A G C T A T G A C C G T A T G C A A T G C C G T A A G C T C G A T A C G T G A C T G A C T G A C T G C T A
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.49
Offset:7
Orientation:forward strand
Alignment:MCAACAACAYTTTTTA--
-------TATTGTTTATT
 G T C A T G A C G T C A G C T A T G A C C G T A T G C A A T G C C G T A A G C T C G A T A C G T G A C T G A C T G A C T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:MCAACAACAYTTTTTA
------CCATTGTTTT
 G T C A T G A C G T C A G C T A T G A C C G T A T G C A A T G C C G T A A G C T C G A T A C G T G A C T G A C T G A C T G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:MCAACAACAYTTTTTA---
--------TNTGTTTACTT
 G T C A T G A C G T C A G C T A T G A C C G T A T G C A A T G C C G T A A G C T C G A T A C G T G A C T G A C T G A C T G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T