Information for 1-RMCMTSWCMYAGGCMC (Motif 1)

C T G A G T A C A G T C G T A C A C G T A T G C C G T A A G T C G T C A A G T C C G T A A C T G A C T G A T G C G T C A A G T C
Reverse Opposite:
A C T G A C G T A T C G A G T C A G T C A C G T C T A G A C G T A C T G C G A T A T C G C G T A A C T G A C T G A C T G A G C T
p-value:1e-11
log p-value:-2.625e+01
Information Content per bp:1.811
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif21.43%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.3 +/- 33.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:RMCMTSWCMYAGGCMC
--------CTAGGCCT
C T G A G T A C A G T C G T A C A C G T A T G C C G T A A G T C G T C A A G T C C G T A A C T G A C T G A T G C G T C A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.52
Offset:4
Orientation:forward strand
Alignment:RMCMTSWCMYAGGCMC
----AGCCTCAGGCA-
C T G A G T A C A G T C G T A C A C G T A T G C C G T A A G T C G T C A A G T C C G T A A C T G A C T G A T G C G T C A A G T C
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:RMCMTSWCMYAGGCMC-------
---------CAGGCCNNGGCCNN
C T G A G T A C A G T C G T A C A C G T A T G C C G T A A G T C G T C A A G T C C G T A A C T G A C T G A T G C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:forward strand
Alignment:RMCMTSWCMYAGGCMC
----CGCCTCAGGCA-
C T G A G T A C A G T C G T A C A C G T A T G C C G T A A G T C G T C A A G T C C G T A A C T G A C T G A T G C G T C A A G T C
A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:RMCMTSWCMYAGGCMC
--------CNAGGCCT
C T G A G T A C A G T C G T A C A C G T A T G C C G T A A G T C G T C A A G T C C G T A A C T G A C T G A T G C G T C A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:RMCMTSWCMYAGGCMC
----AGCCTCAGGCA-
C T G A G T A C A G T C G T A C A C G T A T G C C G T A A G T C G T C A A G T C C G T A A C T G A C T G A T G C G T C A A G T C
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:RMCMTSWCMYAGGCMC
-------CACAGN---
C T G A G T A C A G T C G T A C A C G T A T G C C G T A A G T C G T C A A G T C C G T A A C T G A C T G A T G C G T C A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:8
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:RMCMTSWCMYAGGCMC----
----TGACCCAGTGACCTAC
C T G A G T A C A G T C G T A C A C G T A T G C C G T A A G T C G T C A A G T C C G T A A C T G A C T G A T G C G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:RMCMTSWCMYAGGCMC
AAGGKGRCGCAGGCA-
C T G A G T A C A G T C G T A C A C G T A T G C C G T A A G T C G T C A A G T C C G T A A C T G A C T G A T G C G T C A A G T C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.47
Offset:8
Orientation:forward strand
Alignment:RMCMTSWCMYAGGCMC--
--------CCAGGAACAG
C T G A G T A C A G T C G T A C A C G T A T G C C G T A A G T C G T C A A G T C C G T A A C T G A C T G A T G C G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G