p-value: | 1e-13 |
log p-value: | -3.166e+01 |
Information Content per bp: | 1.757 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.81% |
Number of Background Sequences with motif | 1.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 51.2 +/- 23.7bp |
Average Position of motif in Background | 58.4 +/- 3.1bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CAAACTWGAMAGCCTT ----CTTGAGTGGCT- |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 2 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CAAACTWGAMAGCCTT -----TTGACAGC--- |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 3 |
Score: | 0.52 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CAAACTWGAMAGCCTT ----BTBRAGTGSN-- |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 4 |
Score: | 0.51 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CAAACTWGAMAGCCTT -----TTGAGTGSTT- |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 5 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAAACTWGAMAGCCTT- -AATTTCAAGTGGCTTN |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 6 |
Score: | 0.50 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAAACTWGAMAGCCTT- -AATNTTAAGTGGNTNN |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 7 |
Score: | 0.50 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CAAACTWGAMAGCCTT ----CTYRAGTGSY-- |
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PH0171.1_Nkx2-1/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAAACTWGAMAGCCTT- -AANTTCAAGTGGCTTN |
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PH0114.1_Nkx2-5/Jaspar
Match Rank: | 9 |
Score: | 0.49 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAAACTWGAMAGCCTT- -AAATTCAAGTGGNTTN |
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PH0169.1_Tgif1/Jaspar
Match Rank: | 10 |
Score: | 0.48 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CAAACTWGAMAGCCTT-- -GATATTGACAGCTGCGT |
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