Information for 10-TCAATCWWCC (Motif 34)

A G C T G T A C C G T A G C T A G C A T A G T C G C T A G C T A T A G C G T A C
Reverse Opposite:
A C T G A T C G C G A T C G A T C T A G C G T A C G A T C G A T A C T G T C G A
p-value:1e-6
log p-value:-1.402e+01
Information Content per bp:1.680
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.53%
Number of Background Sequences with motif1139.0
Percentage of Background Sequences with motif2.36%
Average Position of motif in Targets46.2 +/- 26.0bp
Average Position of motif in Background50.0 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TCAATCWWCC
CCAATCAA--
 A G C T G T A C C G T A G C T A G C A T A G T C G C T A G C T A T A G C G T A C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---TCAATCWWCC
CCATCAATCAAA-
 A C G T A C G T A C G T A G C T G T A C C G T A G C T A G C A T A G T C G C T A G C T A T A G C G T A C
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:3
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----TCAATCWWCC-
GAAGATCAATCACTTA
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C C G T A G C T A G C A T A G T C G C T A G C T A T A G C G T A C A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:4
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----TCAATCWWCC-
GAAGATCAATCACTAA
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C C G T A G C T A G C A T A G T C G C T A G C T A T A G C G T A C A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TCAATCWWCC
GYCATCMATCAT--
 A C G T A C G T A C G T A C G T A G C T G T A C C G T A G C T A G C A T A G T C G C T A G C T A T A G C G T A C
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TCAATCWWCC---
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A C G T A G C T G T A C C G T A G C T A G C A T A G T C G C T A G C T A T A G C G T A C A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Hoxa9/MA0594.1/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TCAATCWWCC
GCCATAAATCA---
 A C G T A C G T A C G T A C G T A G C T G T A C C G T A G C T A G C A T A G T C G C T A G C T A T A G C G T A C
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TCAATCWWCC
TCATCAATCA---
 A C G T A C G T A C G T A G C T G T A C C G T A G C T A G C A T A G T C G C T A G C T A T A G C G T A C
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------TCAATCWWCC
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T A C C G T A G C T A G C A T A G T C G C T A G C T A T A G C G T A C
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TCAATCWWCC
GGCCATAAATCA---
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C C G T A G C T A G C A T A G T C G C T A G C T A T A G C G T A C
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T