Information for 8-ATTAMMTMAT (Motif 20)

G T C A G C A T A G C T T G C A T G A C T G A C G C A T G T A C G C T A G C A T
Reverse Opposite:
C G T A C G A T C A T G C G T A A C T G A C T G A C G T T C G A C G T A C A G T
p-value:1e-10
log p-value:-2.456e+01
Information Content per bp:1.519
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.31%
Number of Background Sequences with motif491.3
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets50.8 +/- 29.1bp
Average Position of motif in Background50.7 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUN/MA0488.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:ATTAMMTMAT---
ATGACATCATCNN
 G T C A G C A T A G C T T G C A T G A C T G A C G C A T G T A C G C T A G C A T A C G T A C G T A C G T
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-ATTAMMTMAT----
NATGACATCATCNNN
 A C G T G T C A G C A T A G C T T G C A T G A C T G A C G C A T G T A C G C T A G C A T A C G T A C G T A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

Hoxb5/MA0904.1/Jaspar

Match Rank:3
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------ATTAMMTMAT
ACGGTAATTAGCTCAT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C A T A G C T T G C A T G A C T G A C G C A T G T A C G C T A G C A T
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T

PH0060.1_Hoxb5/Jaspar

Match Rank:4
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------ATTAMMTMAT
ACGGTAATTAGCTCAT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C A T A G C T T G C A T G A C T G A C G C A T G T A C G C T A G C A T
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATTAMMTMAT
ATCACCCCAT
 G T C A G C A T A G C T T G C A T G A C T G A C G C A T G T A C G C T A G C A T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATTAMMTMAT
ATCACCCCAC
 G T C A G C A T A G C T T G C A T G A C T G A C G C A T G T A C G C T A G C A T
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

HLF/MA0043.2/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATTAMMTMAT-
CATTACGTAACC
 A C G T G T C A G C A T A G C T T G C A T G A C T G A C G C A T G T A C G C T A G C A T A C G T
G A T C T C G A G C A T A C G T C T G A A G T C T C A G G A C T G T C A C G T A A G T C G T A C

PH0049.1_Hoxa2/Jaspar

Match Rank:8
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------ATTAMMTMAT
AAGGTAATTAGCTCAT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C A T A G C T T G C A T G A C T G A C G C A T G T A C G C T A G C A T
C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

PH0053.1_Hoxa6/Jaspar

Match Rank:9
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------ATTAMMTMAT
AAGGTAATTACCTAAT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C A T A G C T T G C A T G A C T G A C G C A T G T A C G C T A G C A T
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

TEF/MA0843.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATTAMMTMAT-
TATTACGTAACA
 A C G T G T C A G C A T A G C T T G C A T G A C T G A C G C A T G T A C G C T A G C A T A C G T
A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A