Information for 5-GACACACTGAGCT (Motif 13)

A C T G G T C A G T A C G T C A G T A C C G T A A G T C A C G T C A T G C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G A T G A T C C G T A A C T G A C G T A C T G A C G T C A T G A C G T G T A C
p-value:1e-11
log p-value:-2.576e+01
Information Content per bp:1.824
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.1 +/- 31.4bp
Average Position of motif in Background40.0 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACACACTGAGCT--
TGACCCAGTGACCTAC
 A C G T A C T G G T C A G T A C G T C A G T A C C G T A A G T C A C G T C A T G C G T A A C T G A G T C A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GACACACTGAGCT-
GRACAGWMTGTYCTB
 A C G T A C T G G T C A G T A C G T C A G T A C C G T A A G T C A C G T C A T G C G T A A C T G A G T C A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GACACACTGAGCT-
AGNACAGNCTGTTCTN
 A C G T A C G T A C T G G T C A G T A C G T C A G T A C C G T A A G T C A C G T C A T G C G T A A C T G A G T C A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GACACACTGAGCT-
GVACAGNMTGTYCTB
 A C G T A C T G G T C A G T A C G T C A G T A C C G T A A G T C A C G T C A T G C G T A A C T G A G T C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GACACACTGAGCT-
AGNACANNNTGTNCTN
 A C G T A C G T A C T G G T C A G T A C G T C A G T A C C G T A A G T C A C G T C A T G C G T A A C T G A G T C A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:GACACACTGAGCT-
---------NGCTN
 A C T G G T C A G T A C G T C A G T A C C G T A A G T C A C G T C A T G C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GACACACTGAGCT-
GAACADWATGTTCTT
 A C G T A C T G G T C A G T A C G T C A G T A C C G T A A G T C A C G T C A T G C G T A A C T G A G T C A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GACACACTGAGCT
-MRSCACTYAA--
 A C T G G T C A G T A C G T C A G T A C C G T A A G T C A C G T C A T G C G T A A C T G A G T C A C G T
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GACACACTGAGCT
--CCTGCTGAGH-
 A C T G G T C A G T A C G T C A G T A C C G T A A G T C A C G T C A T G C G T A A C T G A G T C A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GACACACTGAGCT-
GGTCANNGTGACCTN
 A C G T A C T G G T C A G T A C G T C A G T A C C G T A A G T C A C G T C A T G C G T A A C T G A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T