Information for 11-GCACATACAC (Motif 15)

T A C G A G T C C G T A A G T C C T G A A G C T C G T A G T A C C G T A G T A C
Reverse Opposite:
C A T G A C G T A C T G A C G T T C G A G A C T A C T G A C G T A C T G A T G C
p-value:1e-7
log p-value:-1.823e+01
Information Content per bp:1.849
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif62.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets53.5 +/- 21.9bp
Average Position of motif in Background51.8 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCACATACAC
GCACGTACCC
 T A C G A G T C C G T A A G T C C T G A A G C T C G T A G T A C C G T A G T A C
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GCACATACAC--
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T T A C G A G T C C G T A A G T C C T G A A G C T C G T A G T A C C G T A G T A C A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.69
Offset:-7
Orientation:forward strand
Alignment:-------GCACATACAC
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C C G T A A G T C C T G A A G C T C G T A G T A C C G T A G T A C
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCACATACAC
GCACGTAY--
 T A C G A G T C C G T A A G T C C T G A A G C T C G T A G T A C C G T A G T A C
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCACATACAC--
CGAAGCACACAAAATA
 A C G T A C G T A C G T A C G T T A C G A G T C C G T A A G T C C T G A A G C T C G T A G T A C C G T A G T A C A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------GCACATACAC
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C C G T A A G T C C T G A A G C T C G T A G T A C C G T A G T A C
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCACATACAC
BGCACGTA---
 A C G T T A C G A G T C C G T A A G T C C T G A A G C T C G T A G T A C C G T A G T A C
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCACATACAC
GCACGTNC--
 T A C G A G T C C G T A A G T C C T G A A G C T C G T A G T A C C G T A G T A C
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCACATACAC
ACCACTTAA--
 A C G T T A C G A G T C C G T A A G T C C T G A A G C T C G T A G T A C C G T A G T A C
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCACATACAC
GCACTTAA--
 T A C G A G T C C G T A A G T C C T G A A G C T C G T A G T A C C G T A G T A C
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T