Information for 6-GVATAGTGTGACTGGA (Motif 11)

A C T G T C G A C T G A A C G T C G T A A C T G A C G T A C T G A C G T A C T G G T C A A T G C C A G T A C T G A C T G T G C A
Reverse Opposite:
A C G T G T A C A G T C G T C A T A C G A C G T A G T C C G T A G T A C G T C A A G T C C G A T C G T A A G C T A C G T A G T C
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.767
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 27.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GVATAGTGTGACTGGA
--ATGGGGTGAT----
 A C T G T C G A C T G A A C G T C G T A A C T G A C G T A C T G A C G T A C T G G T C A A T G C C A G T A C T G A C T G T G C A
A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GVATAGTGTGACTGGA
--GTGGCGTGACNG--
 A C T G T C G A C T G A A C G T C G T A A C T G A C G T A C T G A C G T A C T G G T C A A T G C C A G T A C T G A C T G T G C A
A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GVATAGTGTGACTGGA
NNNNTTGTGTGCTTNN-
 A C G T A C T G T C G A C T G A A C G T C G T A A C T G A C G T A C T G A C G T A C T G G T C A A T G C C A G T A C T G A C T G T G C A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GVATAGTGTGACTGGA
--GTGGGGTGAT----
 A C T G T C G A C T G A A C G T C G T A A C T G A C G T A C T G A C G T A C T G G T C A A T G C C A G T A C T G A C T G T G C A
A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GVATAGTGTGACTGGA
--ATGGGGTGAT----
 A C T G T C G A C T G A A C G T C G T A A C T G A C G T A C T G A C G T A C T G G T C A A T G C C A G T A C T G A C T G T G C A
A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GVATAGTGTGACTGGA
NNNCCATTGTGTNAN----
 A C G T A C G T A C G T A C T G T C G A C T G A A C G T C G T A A C T G A C G T A C T G A C G T A C T G G T C A A T G C C A G T A C T G A C T G T G C A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GVATAGTGTGACTGGA
NNGCGTGTGTGCNGCN-
 A C G T A C T G T C G A C T G A A C G T C G T A A C T G A C G T A C T G A C G T A C T G G T C A A T G C C A G T A C T G A C T G T G C A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GVATAGTGTGACTGGA
---TWGTCTGV-----
 A C T G T C G A C T G A A C G T C G T A A C T G A C G T A C T G A C G T A C T G G T C A A T G C C A G T A C T G A C T G T G C A
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GVATAGTGTGACTGGA
----TGAGTGACAGSC
 A C T G T C G A C T G A A C G T C G T A A C T G A C G T A C T G A C G T A C T G G T C A A T G C C A G T A C T G A C T G T G C A
A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GVATAGTGTGACTGGA
---TTGCGTGCVA---
 A C T G T C G A C T G A A C G T C G T A A C T G A C G T A C T G A C G T A C T G G T C A A T G C C A G T A C T G A C T G T G C A
A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T