Information for 8-CAGTGCTCATGAG (Motif 10)

A G T C C G T A A C T G A C G T A C T G A G T C A G C T G T A C C G T A C G A T C T A G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C G C T A A C G T A C T G C T G A A C T G A G T C C G T A A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.4 +/- 17.1bp
Average Position of motif in Background50.7 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----CAGTGCTCATGAG
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G A G T C A G C T G T A C C G T A C G A T C T A G C G T A A C T G
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

NRF(NRF)/Promoter/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGTGCTCATGAG-
--GTGCGCATGCGC
 A G T C C G T A A C T G A C G T A C T G A G T C A G C T G T A C C G T A C G A T C T A G C G T A A C T G A C G T
A C G T A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

PH0098.1_Lhx8/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGTGCTCATGAG----
CACCGCTAATTAGNNGN
 A G T C C G T A A C T G A C G T A C T G A G T C A G C T G T A C C G T A C G A T C T A G C G T A A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

PH0058.1_Hoxb3/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGTGCTCATGAG-----
-TGAGCTAATTAGTTGGA
 A G T C C G T A A C T G A C G T A C T G A G T C A G C T G T A C C G T A C G A T C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGTGCTCATGAG
CAAAGGTCAAGGG
 A G T C C G T A A C T G A C G T A C T G A G T C A G C T G T A C C G T A C G A T C T A G C G T A A C T G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGCTCATGAG
TTAAGTGCTT-----
 A C G T A C G T A G T C C G T A A C T G A C G T A C T G A G T C A G C T G T A C C G T A C G A T C T A G C G T A A C T G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGTGCTCATGAG--
TAGTGATCATCATTA
 A G T C C G T A A C T G A C G T A C T G A G T C A G C T G T A C C G T A C G A T C T A G C G T A A C T G A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGCTCATGAG
NNNANTGCAGTGCNNTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G A G T C A G C T G T A C C G T A C G A T C T A G C G T A A C T G
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGTGCTCATGAG-
GGGTGTGCCCAAAAGG
 A C G T A C G T A G T C C G T A A C T G A C G T A C T G A G T C A G C T G T A C C G T A C G A T C T A G C G T A A C T G A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CAGTGCTCATGAG
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G A G T C A G C T G T A C C G T A C G A T C T A G C G T A A C T G
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G