Information for 6-TTCCAGCTCCTTC (Motif 5)

A C G T A C G T A G T C A T G C C G T A A C T G A G T C A C G T G T A C A T G C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A T C G A C T G C G T A C T A G A G T C A C G T A T C G A C T G C G T A C G T A
p-value:1e-11
log p-value:-2.575e+01
Information Content per bp:1.939
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.4 +/- 18.5bp
Average Position of motif in Background41.3 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:1
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------TTCCAGCTCCTTC
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C C G T A A C T G A G T C A C G T G T A C A T G C A C G T A C G T A G T C
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

HSF4/MA0771.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTCCAGCTCCTTC
TTCTAGAACGTTC
 A C G T A C G T A G T C A T G C C G T A A C T G A G T C A C G T G T A C A T G C A C G T A C G T A G T C
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C

HSF1/MA0486.2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTCCAGCTCCTTC
TTCTAGAACGTTC
 A C G T A C G T A G T C A T G C C G T A A C T G A G T C A C G T G T A C A T G C A C G T A C G T A G T C
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTCCAGCTCCTTC--
TTCTAGAABNTTCTA
 A C G T A C G T A G T C A T G C C G T A A C T G A G T C A C G T G T A C A T G C A C G T A C G T A G T C A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

HSF2/MA0770.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTCCAGCTCCTTC
TTCTAGAACGTTC
 A C G T A C G T A G T C A T G C C G T A A C T G A G T C A C G T G T A C A T G C A C G T A C G T A G T C
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTCCAGCTCCTTC--
---CAGCTGTTTCCT
 A C G T A C G T A G T C A T G C C G T A A C T G A G T C A C G T G T A C A T G C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTCCAGCTCCTTC
--CCAGCTGTTN-
 A C G T A C G T A G T C A T G C C G T A A C T G A G T C A C G T G T A C A T G C A C G T A C G T A G T C
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTCCAGCTCCTTC
ASTTTCACTTCC---
 A C G T A C G T A C G T A C G T A G T C A T G C C G T A A C T G A G T C A C G T G T A C A T G C A C G T A C G T A G T C
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTCCAGCTCCTTC
-ACCACATCCTGT
 A C G T A C G T A G T C A T G C C G T A A C T G A G T C A C G T G T A C A T G C A C G T A C G T A G T C
A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTCCAGCTCCTTC
TTTTCCA--------
 A C G T A C G T A C G T A C G T A G T C A T G C C G T A A C T G A G T C A C G T G T A C A T G C A C G T A C G T A G T C
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T