Information for 11-AGGAGGCTTAGTG (Motif 12)

C G T A A C T G A C T G C T G A A C T G A C T G A G T C A C G T C G A T C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T G C T A C G T A A C T G A G T C A G T C A G C T A G T C G T A C C G A T
p-value:1e-7
log p-value:-1.820e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.4 +/- 26.3bp
Average Position of motif in Background28.7 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGGAGGCTTAGTG
AAGAGGATTAG--
 C G T A A C T G A C T G C T G A A C T G A C T G A G T C A C G T C G A T C G T A A C T G A C G T A C T G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGGAGGCTTAGTG
----GGATTAGC-
 C G T A A C T G A C T G C T G A A C T G A C T G A G T C A C G T C G A T C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGAGGCTTAGTG
AGGVNCCTTTGT-
 C G T A A C T G A C T G C T G A A C T G A C T G A G T C A C G T C G A T C G T A A C T G A C G T A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGAGGCTTAGTG
---AGGCCTAG--
 C G T A A C T G A C T G C T G A A C T G A C T G A G T C A C G T C G A T C G T A A C T G A C G T A C T G
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGAGGCTTAGTG
---AGGCCTNG--
 C G T A A C T G A C T G C T G A A C T G A C T G A G T C A C G T C G A T C G T A A C T G A C G T A C T G
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGAGGCTTAGTG---
AGGGGGATTAGCTGCC
 C G T A A C T G A C T G C T G A A C T G A C T G A G T C A C G T C G A T C G T A A C T G A C G T A C T G A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

Dmbx1/MA0883.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGAGGCTTAGTG--
TGAACCGGATTAATGAA
 A C G T A C G T C G T A A C T G A C T G C T G A A C T G A C T G A G T C A C G T C G A T C G T A A C T G A C G T A C T G A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGAGGCTTAGTG--
TGAACCGGATTAATGAA
 A C G T A C G T C G T A A C T G A C T G C T G A A C T G A C T G A G T C A C G T C G A T C G T A A C T G A C G T A C T G A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGGAGGCTTAGTG
--NGGGATTA---
 C G T A A C T G A C T G C T G A A C T G A C T G A G T C A C G T C G A T C G T A A C T G A C G T A C T G
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGGAGGCTTAGTG
---GGGATTANN-
 C G T A A C T G A C T G C T G A A C T G A C T G A G T C A C G T C G A T C G T A A C T G A C G T A C T G
A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T