Information for 5-ATATAGATCCCGG (Motif 4)

C G T A C G A T C G T A A C G T C G T A A C T G C G T A A G C T A G T C A G T C A G T C A C T G A C T G
Reverse Opposite:
A G T C G T A C C T A G A C T G C T A G T C G A A C G T A G T C A C G T G T C A A C G T C G T A A C G T
p-value:1e-12
log p-value:-2.952e+01
Information Content per bp:1.915
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 24.0bp
Average Position of motif in Background62.0 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATATAGATCCCGG
NTATYGATCH---
 C G T A C G A T C G T A A C G T C G T A A C T G C G T A A G C T A G T C A G T C A G T C A C T G A C T G
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATATAGATCCCGG
NGNTCTAGAACCNGV
 A C G T A C G T C G T A C G A T C G T A A C G T C G T A A C T G C G T A A G C T A G T C A G T C A G T C A C T G A C T G
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATATAGATCCCGG-
NNGATCTAGAACCTNNN
 A C G T A C G T A C G T C G T A C G A T C G T A A C G T C G T A A C T G C G T A A G C T A G T C A G T C A G T C A C T G A C T G A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATATAGATCCCGG
--ATTGATTYND-
 C G T A C G A T C G T A A C G T C G T A A C T G C G T A A G C T A G T C A G T C A G T C A C T G A C T G
A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ATATAGATCCCGG
ATGGGATATATCCGCCT-
 A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T C G T A A C T G C G T A A G C T A G T C A G T C A G T C A C T G A C T G
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATATAGATCCCGG
NTATCGATTA---
 C G T A C G A T C G T A A C G T C G T A A C T G C G T A A G C T A G T C A G T C A G T C A C T G A C T G
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATATAGATCCCGG
TTATCGATTA---
 C G T A C G A T C G T A A C G T C G T A A C T G C G T A A G C T A G T C A G T C A G T C A C T G A C T G
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATATAGATCCCGG--
GTATAAAAGGCGGGG
 C G T A C G A T C G T A A C G T C G T A A C T G C G T A A G C T A G T C A G T C A G T C A C T G A C T G A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATATAGATCCCGG--
GTATAAAAGGCGGGG
 C G T A C G A T C G T A A C G T C G T A A C T G C G T A A G C T A G T C A G T C A G T C A C T G A C T G A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATATAGATCCCGG---
NNANTTGACCCCTNNNN
 A C G T C G T A C G A T C G T A A C G T C G T A A C T G C G T A A G C T A G T C A G T C A G T C A C T G A C T G A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G