Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 781)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47938)	% of Background Sequences with Motif
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e-367	-8.460e+02	0.0000	322.0	41.23%	690.3	1.44%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e-275	-6.341e+02	0.0000	233.0	29.83%	423.5	0.88%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-43	-1.009e+02	0.0000	92.0	11.78%	873.7	1.83%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-41	-9.514e+01	0.0000	98.0	12.55%	1080.1	2.26%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-40	-9.387e+01	0.0000	90.0	11.52%	909.0	1.90%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-39	-9.170e+01	0.0000	95.0	12.16%	1053.1	2.20%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-38	-8.912e+01	0.0000	81.0	10.37%	764.1	1.60%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-36	-8.510e+01	0.0000	100.0	12.80%	1274.6	2.66%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e-36	-8.318e+01	0.0000	89.0	11.40%	1022.7	2.14%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-31	-7.256e+01	0.0000	60.0	7.68%	499.9	1.04%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-25	-5.763e+01	0.0000	45.0	5.76%	347.2	0.73%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-16	-3.718e+01	0.0000	101.0	12.93%	2477.5	5.18%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e-11	-2.603e+01	0.0000	124.0	15.88%	3994.5	8.34%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-10	-2.346e+01	0.0000	55.0	7.04%	1243.0	2.60%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-9	-2.227e+01	0.0000	19.0	2.43%	175.8	0.37%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-9	-2.131e+01	0.0000	55.0	7.04%	1320.0	2.76%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-8	-1.929e+01	0.0000	33.0	4.23%	607.3	1.27%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-8	-1.904e+01	0.0000	69.0	8.83%	1978.5	4.13%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-8	-1.898e+01	0.0000	74.0	9.48%	2193.7	4.58%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-7	-1.827e+01	0.0000	38.0	4.87%	804.3	1.68%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-7	-1.815e+01	0.0000	62.0	7.94%	1731.3	3.62%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-7	-1.786e+01	0.0000	68.0	8.71%	1997.4	4.17%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-7	-1.647e+01	0.0000	101.0	12.93%	3575.5	7.47%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-7	-1.646e+01	0.0000	21.0	2.69%	307.6	0.64%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-7	-1.643e+01	0.0000	51.0	6.53%	1364.4	2.85%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-7	-1.632e+01	0.0000	19.0	2.43%	255.4	0.53%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-5	-1.314e+01	0.0000	20.0	2.56%	348.0	0.73%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-5	-1.283e+01	0.0000	35.0	4.48%	888.5	1.86%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-5	-1.186e+01	0.0001	18.0	2.30%	315.8	0.66%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-5	-1.161e+01	0.0001	22.0	2.82%	453.7	0.95%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-5	-1.155e+01	0.0001	8.0	1.02%	61.0	0.13%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-4	-1.061e+01	0.0003	74.0	9.48%	2755.3	5.76%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-4	-1.019e+01	0.0004	9.0	1.15%	96.7	0.20%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-4	-1.019e+01	0.0004	9.0	1.15%	96.7	0.20%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-4	-1.019e+01	0.0004	17.0	2.18%	325.3	0.68%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e-4	-9.492e+00	0.0008	71.0	9.09%	2709.0	5.66%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e-3	-9.194e+00	0.0010	6.0	0.77%	44.5	0.09%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-3	-9.090e+00	0.0011	98.0	12.55%	4107.0	8.58%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-3	-8.890e+00	0.0013	43.0	5.51%	1434.1	3.00%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-3	-8.767e+00	0.0014	10.0	1.28%	143.9	0.30%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-3	-8.344e+00	0.0021	23.0	2.94%	608.5	1.27%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-3	-8.200e+00	0.0024	6.0	0.77%	53.4	0.11%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e-3	-8.050e+00	0.0027	50.0	6.40%	1821.8	3.81%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-3	-8.006e+00	0.0028	9.0	1.15%	129.8	0.27%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e-3	-7.813e+00	0.0033	188.0	24.07%	9173.5	19.16%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-3	-7.639e+00	0.0038	6.0	0.77%	59.4	0.12%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-3	-7.625e+00	0.0038	38.0	4.87%	1294.7	2.70%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-3	-7.178e+00	0.0058	41.0	5.25%	1466.1	3.06%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-3	-7.056e+00	0.0064	14.0	1.79%	315.2	0.66%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e-2	-6.761e+00	0.0084	2.0	0.26%	3.8	0.01%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-2	-6.639e+00	0.0093	33.0	4.23%	1135.9	2.37%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e-2	-6.419e+00	0.0114	17.0	2.18%	454.7	0.95%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-2	-6.337e+00	0.0121	23.0	2.94%	708.2	1.48%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-2	-6.177e+00	0.0140	38.0	4.87%	1405.2	2.94%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-2	-6.013e+00	0.0162	16.0	2.05%	432.6	0.90%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-2	-5.456e+00	0.0278	147.0	18.82%	7318.3	15.29%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e-2	-5.173e+00	0.0362	43.0	5.51%	1744.1	3.64%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-2	-5.090e+00	0.0387	26.0	3.33%	925.5	1.93%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-2	-4.841e+00	0.0487	19.0	2.43%	622.5	1.30%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-2	-4.737e+00	0.0532	15.0	1.92%	453.4	0.95%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-2	-4.642e+00	0.0575	21.0	2.69%	726.2	1.52%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e-1	-4.410e+00	0.0714	53.0	6.79%	2349.9	4.91%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e-1	-4.262e+00	0.0814	36.0	4.61%	1489.8	3.11%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e-1	-4.240e+00	0.0819	13.0	1.66%	394.7	0.82%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e-1	-4.193e+00	0.0845	15.0	1.92%	484.2	1.01%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e-1	-4.110e+00	0.0905	11.0	1.41%	316.3	0.66%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e-1	-4.094e+00	0.0906	6.0	0.77%	123.7	0.26%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-1	-3.951e+00	0.1029	43.0	5.51%	1886.5	3.94%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e-1	-3.888e+00	0.1081	12.0	1.54%	370.2	0.77%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-1	-3.866e+00	0.1089	18.0	2.30%	643.5	1.34%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e-1	-3.840e+00	0.1101	16.0	2.05%	552.2	1.15%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e-1	-3.756e+00	0.1181	22.0	2.82%	844.0	1.76%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-1	-3.710e+00	0.1221	15.0	1.92%	515.8	1.08%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e-1	-3.664e+00	0.1261	6.0	0.77%	136.8	0.29%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-1	-3.458e+00	0.1528	26.0	3.33%	1070.6	2.24%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e-1	-3.258e+00	0.1841	9.0	1.15%	274.7	0.57%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e-1	-3.224e+00	0.1881	16.0	2.05%	598.1	1.25%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e-1	-3.165e+00	0.1969	7.0	0.90%	194.7	0.41%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e-1	-3.135e+00	0.2003	118.0	15.11%	6203.7	12.96%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e-1	-3.095e+00	0.2059	36.0	4.61%	1633.0	3.41%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e-1	-3.000e+00	0.2236	10.0	1.28%	333.5	0.70%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e-1	-2.935e+00	0.2358	67.0	8.58%	3356.2	7.01%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-1	-2.899e+00	0.2415	9.0	1.15%	294.9	0.62%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-1	-2.858e+00	0.2487	30.0	3.84%	1348.9	2.82%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e-1	-2.820e+00	0.2552	4.0	0.51%	89.8	0.19%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e-1	-2.776e+00	0.2635	24.0	3.07%	1044.7	2.18%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e-1	-2.696e+00	0.2824	11.0	1.41%	401.0	0.84%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-1	-2.595e+00	0.3088	14.0	1.79%	554.2	1.16%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e-1	-2.566e+00	0.3144	42.0	5.38%	2041.6	4.26%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-1	-2.538e+00	0.3196	63.0	8.07%	3217.2	6.72%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e-1	-2.506e+00	0.3264	9.0	1.15%	319.9	0.67%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-1	-2.490e+00	0.3282	35.0	4.48%	1671.8	3.49%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-1	-2.404e+00	0.3537	58.0	7.43%	2965.9	6.20%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e-1	-2.402e+00	0.3537	12.0	1.54%	472.4	0.99%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e-1	-2.378e+00	0.3553	51.0	6.53%	2577.8	5.39%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e-1	-2.369e+00	0.3553	7.0	0.90%	235.2	0.49%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-2.282e+00	0.3831	90.0	11.52%	4826.1	10.08%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-2.281e+00	0.3831	46.0	5.89%	2317.6	4.84%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-2.266e+00	0.3831	35.0	4.48%	1709.7	3.57%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-2.264e+00	0.3831	115.0	14.72%	6285.2	13.13%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-2.193e+00	0.4019	43.0	5.51%	2167.6	4.53%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-2.187e+00	0.4019	6.0	0.77%	200.3	0.42%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-2.186e+00	0.4019	37.0	4.74%	1834.6	3.83%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-2.140e+00	0.4120	2.0	0.26%	36.8	0.08%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-2.101e+00	0.4240	50.0	6.40%	2581.2	5.39%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-2.072e+00	0.4324	15.0	1.92%	658.2	1.37%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-2.067e+00	0.4324	9.0	1.15%	352.2	0.74%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-2.054e+00	0.4324	6.0	0.77%	208.5	0.44%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-2.042e+00	0.4335	17.0	2.18%	767.6	1.60%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-2.007e+00	0.4449	82.0	10.50%	4444.2	9.28%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-1.948e+00	0.4674	69.0	8.83%	3708.1	7.75%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.924e+00	0.4747	12.0	1.54%	518.6	1.08%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-1.905e+00	0.4792	73.0	9.35%	3952.8	8.26%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-1.878e+00	0.4883	42.0	5.38%	2178.2	4.55%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-1.847e+00	0.4992	25.0	3.20%	1230.5	2.57%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.786e+00	0.5261	6.0	0.77%	226.1	0.47%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-1.773e+00	0.5284	62.0	7.94%	3353.5	7.01%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.731e+00	0.5462	6.0	0.77%	230.5	0.48%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-1.727e+00	0.5462	27.0	3.46%	1363.2	2.85%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.712e+00	0.5476	9.0	1.15%	384.7	0.80%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.674e+00	0.5642	34.0	4.35%	1769.6	3.70%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.662e+00	0.5662	9.0	1.15%	389.8	0.81%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-1.654e+00	0.5663	27.0	3.46%	1377.1	2.88%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-1.652e+00	0.5663	9.0	1.15%	390.6	0.82%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-1.615e+00	0.5793	6.0	0.77%	239.2	0.50%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-1.571e+00	0.6005	3.0	0.38%	96.4	0.20%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-1.551e+00	0.6078	3.0	0.38%	97.8	0.20%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-1.542e+00	0.6078	4.0	0.51%	145.1	0.30%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-1.542e+00	0.6078	4.0	0.51%	145.5	0.30%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-1.539e+00	0.6078	2.0	0.26%	53.3	0.11%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-1.535e+00	0.6078	22.0	2.82%	1118.7	2.34%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.533e+00	0.6078	5.0	0.64%	195.9	0.41%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	-1.527e+00	0.6078	1.0	0.13%	15.1	0.03%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.507e+00	0.6078	5.0	0.64%	197.0	0.41%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-1.487e+00	0.6093	25.0	3.20%	1297.1	2.71%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-1.480e+00	0.6093	4.0	0.51%	149.0	0.31%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-1.463e+00	0.6150	31.0	3.97%	1645.9	3.44%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-1.459e+00	0.6150	2.0	0.26%	56.7	0.12%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-1.445e+00	0.6174	11.0	1.41%	522.0	1.09%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.408e+00	0.6360	57.0	7.30%	3173.6	6.63%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-1.406e+00	0.6360	79.0	10.12%	4472.0	9.34%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-1.399e+00	0.6360	15.0	1.92%	749.9	1.57%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.398e+00	0.6360	47.0	6.02%	2590.1	5.41%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-1.377e+00	0.6377	29.0	3.71%	1550.5	3.24%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-1.368e+00	0.6390	1.0	0.13%	18.3	0.04%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-1.362e+00	0.6390	8.0	1.02%	368.0	0.77%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.350e+00	0.6419	25.0	3.20%	1326.8	2.77%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-1.346e+00	0.6419	34.0	4.35%	1847.0	3.86%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-1.345e+00	0.6419	7.0	0.90%	316.1	0.66%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.345e+00	0.6419	8.0	1.02%	370.0	0.77%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-1.322e+00	0.6427	1.0	0.13%	19.6	0.04%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-1.302e+00	0.6513	15.0	1.92%	765.1	1.60%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-1.288e+00	0.6562	5.0	0.64%	216.0	0.45%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-1.280e+00	0.6572	24.0	3.07%	1284.6	2.68%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-1.269e+00	0.6599	27.0	3.46%	1460.8	3.05%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-1.239e+00	0.6756	64.0	8.19%	3646.8	7.62%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.238e+00	0.6756	40.0	5.12%	2228.8	4.66%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-1.215e+00	0.6836	22.0	2.82%	1183.0	2.47%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-1.195e+00	0.6929	26.0	3.33%	1420.9	2.97%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-1.171e+00	0.7056	13.0	1.66%	674.8	1.41%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.148e+00	0.7172	42.0	5.38%	2374.8	4.96%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-1.141e+00	0.7181	22.0	2.82%	1200.1	2.51%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-1.131e+00	0.7209	67.0	8.58%	3868.6	8.08%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.127e+00	0.7209	118.0	15.11%	6932.7	14.48%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.114e+00	0.7242	2.0	0.26%	72.1	0.15%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-1.110e+00	0.7242	3.0	0.38%	124.7	0.26%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.098e+00	0.7270	75.0	9.60%	4361.9	9.11%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-1.097e+00	0.7270	3.0	0.38%	125.7	0.26%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.092e+00	0.7270	8.0	1.02%	402.8	0.84%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.081e+00	0.7270	7.0	0.90%	347.7	0.73%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-1.069e+00	0.7308	32.0	4.10%	1807.5	3.78%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-1.068e+00	0.7308	56.0	7.17%	3236.1	6.76%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-1.058e+00	0.7308	7.0	0.90%	350.9	0.73%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.058e+00	0.7308	3.0	0.38%	128.6	0.27%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.057e+00	0.7308	25.0	3.20%	1397.2	2.92%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.044e+00	0.7308	9.0	1.15%	466.3	0.97%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.011e+00	0.7483	22.0	2.82%	1232.5	2.57%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.003e+00	0.7500	19.0	2.43%	1057.1	2.21%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-9.754e-01	0.7667	5.0	0.64%	247.4	0.52%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-9.748e-01	0.7667	15.0	1.92%	828.2	1.73%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-9.654e-01	0.7667	16.0	2.05%	889.4	1.86%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-9.568e-01	0.7682	8.0	1.02%	422.4	0.88%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-9.544e-01	0.7682	19.0	2.43%	1069.7	2.23%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-9.498e-01	0.7682	3.0	0.38%	137.0	0.29%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-9.471e-01	0.7682	22.0	2.82%	1249.2	2.61%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-9.277e-01	0.7739	26.0	3.33%	1493.1	3.12%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-9.236e-01	0.7739	4.0	0.51%	196.3	0.41%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-9.198e-01	0.7739	47.0	6.02%	2757.0	5.76%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-9.186e-01	0.7739	69.0	8.83%	4084.6	8.53%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-8.952e-01	0.7827	3.0	0.38%	142.9	0.30%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-8.871e-01	0.7849	21.0	2.69%	1206.5	2.52%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-8.720e-01	0.7927	42.0	5.38%	2474.0	5.17%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-8.569e-01	0.8006	79.0	10.12%	4722.9	9.87%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-8.439e-01	0.8069	3.0	0.38%	147.1	0.31%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-8.435e-01	0.8069	24.0	3.07%	1399.1	2.92%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-8.395e-01	0.8069	47.0	6.02%	2790.4	5.83%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-8.370e-01	0.8069	55.0	7.04%	3276.1	6.84%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-8.255e-01	0.8069	12.0	1.54%	683.5	1.43%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-8.171e-01	0.8080	44.0	5.63%	2618.3	5.47%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-8.045e-01	0.8141	63.0	8.07%	3778.5	7.89%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-8.011e-01	0.8141	32.0	4.10%	1897.5	3.96%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-7.975e-01	0.8141	33.0	4.23%	1959.8	4.09%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-7.960e-01	0.8141	4.0	0.51%	211.3	0.44%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-7.955e-01	0.8141	89.0	11.40%	5366.8	11.21%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-7.856e-01	0.8141	21.0	2.69%	1236.7	2.58%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-7.802e-01	0.8141	18.0	2.30%	1056.5	2.21%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-7.788e-01	0.8141	34.0	4.35%	2027.9	4.24%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-7.693e-01	0.8141	201.0	25.74%	12226.0	25.54%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-7.689e-01	0.8141	25.0	3.20%	1484.5	3.10%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-7.576e-01	0.8141	5.0	0.64%	276.7	0.58%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-7.247e-01	0.8358	3.0	0.38%	160.8	0.34%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-7.177e-01	0.8377	6.0	0.77%	343.0	0.72%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-7.172e-01	0.8377	54.0	6.91%	3275.3	6.84%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-7.160e-01	0.8377	12.0	1.54%	709.8	1.48%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-7.144e-01	0.8377	51.0	6.53%	3093.9	6.46%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-7.047e-01	0.8377	13.0	1.66%	773.9	1.62%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-6.945e-01	0.8377	14.0	1.79%	837.4	1.75%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-6.929e-01	0.8377	4.0	0.51%	225.6	0.47%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-6.830e-01	0.8395	8.0	1.02%	472.9	0.99%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-6.803e-01	0.8395	14.0	1.79%	841.6	1.76%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-6.763e-01	0.8395	26.0	3.33%	1579.4	3.30%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-6.386e-01	0.8658	104.0	13.32%	6392.8	13.35%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-6.386e-01	0.8658	1.0	0.13%	46.1	0.10%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-6.291e-01	0.8662	15.0	1.92%	918.9	1.92%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-6.192e-01	0.8710	31.0	3.97%	1911.8	3.99%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-6.012e-01	0.8829	15.0	1.92%	927.5	1.94%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-5.990e-01	0.8829	183.0	23.43%	11282.0	23.57%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-5.808e-01	0.8932	35.0	4.48%	2177.6	4.55%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-5.801e-01	0.8932	15.0	1.92%	934.3	1.95%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-5.797e-01	0.8932	11.0	1.41%	684.3	1.43%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-5.788e-01	0.8932	33.0	4.23%	2054.9	4.29%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-5.769e-01	0.8932	5.0	0.64%	307.1	0.64%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-5.742e-01	0.8932	55.0	7.04%	3419.2	7.14%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-5.615e-01	0.8932	3.0	0.38%	182.4	0.38%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-5.535e-01	0.8932	69.0	8.83%	4299.7	8.98%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-5.516e-01	0.8932	4.0	0.51%	248.6	0.52%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-5.477e-01	0.8932	2.0	0.26%	119.7	0.25%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-5.347e-01	0.8960	1.0	0.13%	54.7	0.11%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-5.219e-01	0.9037	53.0	6.79%	3329.6	6.96%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-5.205e-01	0.9037	6.0	0.77%	383.9	0.80%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-5.200e-01	0.9037	9.0	1.15%	575.1	1.20%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-5.197e-01	0.9037	70.0	8.96%	4386.6	9.16%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-5.151e-01	0.9037	33.0	4.23%	2087.3	4.36%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-5.037e-01	0.9037	28.0	3.59%	1780.1	3.72%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-5.003e-01	0.9037	3.0	0.38%	192.7	0.40%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-4.828e-01	0.9131	16.0	2.05%	1033.3	2.16%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-4.777e-01	0.9140	70.0	8.96%	4420.0	9.23%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-4.766e-01	0.9140	44.0	5.63%	2798.2	5.85%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-4.741e-01	0.9140	19.0	2.43%	1227.3	2.56%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-4.703e-01	0.9140	4.0	0.51%	265.0	0.55%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-4.661e-01	0.9140	72.0	9.22%	4553.0	9.51%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-4.642e-01	0.9140	38.0	4.87%	2430.2	5.08%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-4.325e-01	0.9336	12.0	1.54%	797.2	1.67%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-4.199e-01	0.9417	23.0	2.94%	1509.0	3.15%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-4.123e-01	0.9451	2.0	0.26%	139.5	0.29%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-4.103e-01	0.9451	6.0	0.77%	412.5	0.86%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-4.084e-01	0.9451	7.0	0.90%	479.4	1.00%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-3.924e-01	0.9530	16.0	2.05%	1073.7	2.24%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-3.872e-01	0.9542	6.0	0.77%	419.8	0.88%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-3.827e-01	0.9548	69.0	8.83%	4440.9	9.28%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-3.827e-01	0.9548	8.0	1.02%	554.6	1.16%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-3.738e-01	0.9560	2.0	0.26%	146.5	0.31%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-3.721e-01	0.9560	15.0	1.92%	1018.4	2.13%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-3.632e-01	0.9589	20.0	2.56%	1347.5	2.82%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-3.539e-01	0.9642	53.0	6.79%	3459.8	7.23%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-3.471e-01	0.9671	30.0	3.84%	2001.9	4.18%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-3.457e-01	0.9671	5.0	0.64%	364.9	0.76%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-3.415e-01	0.9671	7.0	0.90%	502.6	1.05%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-3.356e-01	0.9674	10.0	1.28%	706.9	1.48%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-3.347e-01	0.9674	1.0	0.13%	77.0	0.16%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-3.276e-01	0.9680	63.0	8.07%	4117.1	8.60%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-3.274e-01	0.9680	29.0	3.71%	1951.3	4.08%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-3.220e-01	0.9680	1.0	0.13%	79.7	0.17%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-3.192e-01	0.9680	6.0	0.77%	442.8	0.92%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-3.188e-01	0.9680	24.0	3.07%	1634.5	3.41%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-2.978e-01	0.9792	3.0	0.38%	237.1	0.50%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-2.974e-01	0.9792	32.0	4.10%	2168.1	4.53%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-2.931e-01	0.9792	31.0	3.97%	2107.9	4.40%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-2.928e-01	0.9792	15.0	1.92%	1061.7	2.22%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-2.810e-01	0.9816	6.0	0.77%	457.7	0.96%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-2.703e-01	0.9885	15.0	1.92%	1075.4	2.25%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-2.702e-01	0.9885	20.0	2.56%	1407.6	2.94%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-2.683e-01	0.9885	3.0	0.38%	246.8	0.52%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-2.683e-01	0.9885	3.0	0.38%	246.3	0.51%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-2.632e-01	0.9885	11.0	1.41%	810.7	1.69%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-2.583e-01	0.9885	37.0	4.74%	2527.2	5.28%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-2.506e-01	0.9885	29.0	3.71%	2014.2	4.21%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-2.491e-01	0.9885	6.0	0.77%	471.2	0.98%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-2.474e-01	0.9885	3.0	0.38%	253.5	0.53%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-2.450e-01	0.9885	12.0	1.54%	889.4	1.86%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-2.449e-01	0.9885	54.0	6.91%	3637.1	7.60%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-2.426e-01	0.9885	1.0	0.13%	94.2	0.20%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-2.400e-01	0.9885	9.0	1.15%	687.0	1.44%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-2.371e-01	0.9885	16.0	2.05%	1165.3	2.43%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-2.319e-01	0.9885	11.0	1.41%	829.1	1.73%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-2.298e-01	0.9885	69.0	8.83%	4617.2	9.65%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e0	-2.192e-01	0.9885	35.0	4.48%	2438.9	5.10%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-2.150e-01	0.9885	2.0	0.26%	186.7	0.39%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-2.116e-01	0.9885	46.0	5.89%	3163.7	6.61%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-2.107e-01	0.9885	4.0	0.51%	343.7	0.72%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-2.099e-01	0.9885	31.0	3.97%	2186.7	4.57%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-2.022e-01	0.9885	23.0	2.94%	1664.5	3.48%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.967e-01	0.9885	9.0	1.15%	713.9	1.49%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-1.945e-01	0.9885	56.0	7.17%	3834.3	8.01%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-1.842e-01	0.9927	15.0	1.92%	1140.5	2.38%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-1.832e-01	0.9927	43.0	5.51%	3006.7	6.28%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.813e-01	0.9927	1.0	0.13%	110.1	0.23%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.713e-01	0.9958	5.0	0.64%	439.3	0.92%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.671e-01	0.9967	15.0	1.92%	1156.4	2.42%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-1.606e-01	0.9999	110.0	14.08%	7355.2	15.37%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-1.596e-01	0.9999	27.0	3.46%	1980.0	4.14%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.587e-01	0.9999	3.0	0.38%	291.3	0.61%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.576e-01	0.9999	13.0	1.66%	1026.8	2.15%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.534e-01	0.9999	11.0	1.41%	889.4	1.86%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.497e-01	0.9999	10.0	1.28%	821.4	1.72%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-1.446e-01	0.9999	161.0	20.61%	10623.0	22.19%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-1.330e-01	1.0000	2.0	0.26%	221.9	0.46%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.300e-01	1.0000	10.0	1.28%	840.4	1.76%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-1.300e-01	1.0000	17.0	2.18%	1336.1	2.79%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.298e-01	1.0000	3.0	0.38%	308.4	0.64%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-1.265e-01	1.0000	45.0	5.76%	3231.5	6.75%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.245e-01	1.0000	45.0	5.76%	3235.1	6.76%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.161e-01	1.0000	12.0	1.54%	1000.9	2.09%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.108e-01	1.0000	1.0	0.13%	138.6	0.29%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-9.088e-02	1.0000	17.0	2.18%	1394.4	2.91%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-9.052e-02	1.0000	2.0	0.26%	249.2	0.52%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-8.841e-02	1.0000	19.0	2.43%	1540.5	3.22%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-8.777e-02	1.0000	29.0	3.71%	2236.0	4.67%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-8.151e-02	1.0000	20.0	2.56%	1624.1	3.39%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-8.035e-02	1.0000	32.0	4.10%	2459.7	5.14%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-7.631e-02	1.0000	28.0	3.59%	2194.2	4.58%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-7.491e-02	1.0000	32.0	4.10%	2473.9	5.17%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-7.100e-02	1.0000	1.0	0.13%	164.6	0.34%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-6.748e-02	1.0000	1.0	0.13%	168.0	0.35%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-6.626e-02	1.0000	15.0	1.92%	1298.1	2.71%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-6.201e-02	1.0000	1.0	0.13%	172.3	0.36%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-6.193e-02	1.0000	94.0	12.04%	6640.7	13.87%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-5.782e-02	1.0000	20.0	2.56%	1680.3	3.51%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-5.722e-02	1.0000	53.0	6.79%	3955.4	8.26%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-5.260e-02	1.0000	69.0	8.83%	5043.6	10.54%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-4.495e-02	1.0000	130.0	16.65%	9070.7	18.95%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-4.159e-02	1.0000	43.0	5.51%	3347.8	6.99%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-3.996e-02	1.0000	17.0	2.18%	1518.0	3.17%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-3.796e-02	1.0000	7.0	0.90%	755.8	1.58%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-3.611e-02	1.0000	42.0	5.38%	3307.1	6.91%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-1.665e-02	1.0000	42.0	5.38%	3456.7	7.22%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.624e-02	1.0000	13.0	1.66%	1332.7	2.78%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.607e-02	1.0000	18.0	2.30%	1720.8	3.59%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-1.607e-02	1.0000	18.0	2.30%	1720.7	3.59%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-7.126e-03	1.0000	4.0	0.51%	641.9	1.34%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-8.260e-04	1.0000	3.0	0.38%	698.0	1.46%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	20.8	0.04%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	181.1	0.38%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	14.2	0.03%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	0.000e+00	1.0000	0.0	0.00%	133.5	0.28%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	20.2	0.04%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	13.7	0.03%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	47.5	0.10%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	223.0	0.47%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	16.5	0.03%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	16.5	0.03%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	41.5	0.09%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	33.6	0.07%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	19.1	0.04%