Information for 4-KGCCCTCTMGTGG (Motif 6)

A C G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T G T C A A T C G A C G T A C T G C A T G
Reverse Opposite:
G A T C A G T C C G T A A T G C A C G T C G T A A C T G C G T A A C T G A C T G A C T G A G T C G T C A
p-value:1e-11
log p-value:-2.732e+01
Information Content per bp:1.907
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.0 +/- 13.9bp
Average Position of motif in Background34.1 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----KGCCCTCTMGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T G T C A A T C G A C G T A C T G C A T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---KGCCCTCTMGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T G T C A A T C G A C G T A C T G C A T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.80
Offset:-6
Orientation:forward strand
Alignment:------KGCCCTCTMGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T G T C A A T C G A C G T A C T G C A T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-KGCCCTCTMGTGG
NTGCCCANNGGTNA
 A C G T A C G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T G T C A A T C G A C G T A C T G C A T G
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:KGCCCTCTMGTGG--
---------GTGGAT
 A C G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T G T C A A T C G A C G T A C T G C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:KGCCCTCTMGTGG----
TGACCTTTCGTGACCTT
 A C G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T G T C A A T C G A C G T A C T G C A T G A C G T A C G T A C G T A C G T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:KGCCCTCTMGTGG-
----NTCAAGTGGN
 A C G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T G T C A A T C G A C G T A C T G C A T G A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:KGCCCTCTMGTGG----
NANTTTCAAGTGGTTAN
 A C G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T G T C A A T C G A C G T A C T G C A T G A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:KGCCCTCTMGTGG
----NTCAAGTGG
 A C G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T G T C A A T C G A C G T A C T G C A T G
A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-KGCCCTCTMGTGG
ATGCCCACC-----
 A C G T A C G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T G T C A A T C G A C G T A C T G C A T G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T