Information for 2-TMATMATATAKRWAAT (Motif 4)

A C G T G T A C C T G A A C G T T G C A G T C A A C G T C T G A C G A T C T G A C A G T C T A G C G A T C G T A G T C A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A A G T C G T C A A G C T C G T A A G C T C G T A A C G T A C G T C G T A A G C T C A T G C G T A
p-value:1e-16
log p-value:-3.827e+01
Information Content per bp:1.856
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.1 +/- 22.6bp
Average Position of motif in Background74.9 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TMATMATATAKRWAAT
NANTTATATATAANGN
 A C G T G T A C C T G A A C G T T G C A G T C A A C G T C T G A C G A T C T G A C A G T C T A G C G A T C G T A G T C A A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TMATMATATAKRWAAT---
-----AAATAAGAAAAAAC
 A C G T G T A C C T G A A C G T T G C A G T C A A C G T C T G A C G A T C T G A C A G T C T A G C G A T C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TMATMATATAKRWAAT
--CTAATATTGCTAAA
 A C G T G T A C C T G A A C G T T G C A G T C A A C G T C T G A C G A T C T G A C A G T C T A G C G A T C G T A G T C A A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TMATMATATAKRWAAT
--CTAATATTGCTAAA
 A C G T G T A C C T G A A C G T T G C A G T C A A C G T C T G A C G A T C T G A C A G T C T A G C G A T C G T A G T C A A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0129.1_Glis2_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TMATMATATAKRWAAT
TCTTTANTAATANN------
 A C G T A C G T A C G T A C G T A C G T G T A C C T G A A C G T T G C A G T C A A C G T C T G A C G A T C T G A C A G T C T A G C G A T C G T A G T C A A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TMATMATATAKRWAAT
TTTAATTATAATTAAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A C G T T G C A G T C A A C G T C T G A C G A T C T G A C A G T C T A G C G A T C G T A G T C A A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G A C G T A C G T A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TMATMATATAKRWAAT
TATCATAATTAAGGA---
 A C G T A C G T A C G T G T A C C T G A A C G T T G C A G T C A A C G T C T G A C G A T C T G A C A G T C T A G C G A T C G T A G T C A A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TMATMATATAKRWAAT
TATAATTATAATATTC-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A C G T T G C A G T C A A C G T C T G A C G A T C T G A C A G T C T A G C G A T C G T A G T C A A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T A C G T A C G T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TMATMATATAKRWAAT---
--TAAATGTAAACAAAGGT
 A C G T G T A C C T G A A C G T T G C A G T C A A C G T C T G A C G A T C T G A C A G T C T A G C G A T C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TMATMATATAKRWAAT
CTCATTAATTATGCAT-
 A C G T A C G T G T A C C T G A A C G T T G C A G T C A A C G T C T G A C G A T C T G A C A G T C T A G C G A T C G T A G T C A A C G T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T A C G T