Information for 11-GAAAGTAAATAGC (Motif 17)

A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G T C
p-value:1e-6
log p-value:-1.426e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.5 +/- 21.8bp
Average Position of motif in Background86.3 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GAAAGTAAATAGC
-AAAGTAAACA--
 A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GAAAGTAAATAGC
-WAAGTAAAYA--
 A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GAAAGTAAATAGC
-AAAGTAAACA--
 A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAAAGTAAATAGC
-TATGTAAATAT-
 A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C
A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GAAAGTAAATAGC--
CAAAGTAAACANNNN
 A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAAAGTAAATAGC
-TATGTAAATAT-
 A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGTAAATAGC
NCTAAGTAAACA--
 A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GAAAGTAAATAGC
-TATGTAAACANG
 A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C
A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GAAAGTAAATAGC
--AAATAAACA--
 A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGTAAATAGC-
NCWRWGTAAACANSV
 A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G